| Protein: | hil-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 208 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hil-3.
| Description | E-value | Query Range |
Subject Range |
|
|
136.0 | [0..10] | [191..413] |
|
|
135.0 | [0..10] | [192..408] |
|
|
134.0 | [0..32] | [191..322] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MSDTVVASAA VQAPAKTVKS PKAAKTTKVP KAKKPVAHPP YINMVTAAIN GLKERKGSSK 60
61 IAILKYITKN YNVGDQIIKI NARLRDTLNK GVVSKALVQS VGTGASGRFR VTEKKAAAAK 120
121 KPVA
|
| Detection Method: |  |
| Confidence: | 9.154902 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [125-208] |
1 11 21 31 41 51
| | | | | |
1 KKAATGEKKA KKPVAQKAAT GEKKAKKTTA TKTKKTADKV KKVKSPKKIA KPTAKKVAKS 60
61 PAKKSAPKKA AAAKPAKKAV APKT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
