| Protein: | CE04287 |
| Organism: | Caenorhabditis elegans |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-58] |
1 11 21 31 41 51
| | | | | |
1 MMQDTKDEHL TSFAENPTKS VERDALVEPQ FTRPEQVEKT HVEEAKWPWG KGKKNEKM
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [59-463] |
1 11 21 31 41 51
| | | | | |
1 PRFLVTILLI CLLVAALLIA LIAIVWALNS NSASVREPEI VYTIPSRDNQ KDNVVHARSN 60
61 IPKTLKKSLD LLEEDTTTIT TTTSQTPDDY DTTEPFVEEE EYHLEEATEH HEIATIEATT 120
121 PEPSEIATKK PIIYYSPPTT PKTTTSTGYL QFYDSIDGDA SDNCLERLAL GSPSGVYSIQ 180
181 SVEKFQAFCD MDTTTGGWTV IQRRVDGDGS FHRGTMKKFV EGFGNLQGSH WLGLEKLHNL 240
241 APIGATPAIL RIEIQGETCD LTCSKRFANT WVGEWKVNFG KKQDGYKIQI TEEGVGNLTY 300
301 NGVDPFFGAN GRRFSTNDND QDENTFMNCA QFRMVGPWWH PKSCSDVGLN GYFQTTSEKY 360
361 DVKDRNQNAK RYFVWAFDKQ IYNGYPYTIH VRKSTMLLKT GDPQR
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1m1jC |
| Description: | Fibrinogen C-terminal domains; Fibrinogen gamma chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 1.9776581053362 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 1.88588139563708 | bayes_pls_golite062009 |
| integrin binding | 1.84403663032634 | bayes_pls_golite062009 |
| carbohydrate binding | 1.60481550486624 | bayes_pls_golite062009 |
| cell surface binding | 1.53370693640531 | bayes_pls_golite062009 |
| binding | 0.811708735919118 | bayes_pls_golite062009 |
| polysaccharide binding | 0.578727264859991 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 0.27731523067605 | bayes_pls_golite062009 |
| protein binding | 0.249736491712423 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 0.10959185189203 | bayes_pls_golite062009 |
