Protein: | CE04287 |
Organism: | Caenorhabditis elegans |
Length: | 463 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Region A: Residues: [1-58] |
1 11 21 31 41 51 | | | | | | 1 MMQDTKDEHL TSFAENPTKS VERDALVEPQ FTRPEQVEKT HVEEAKWPWG KGKKNEKM |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [59-463] |
1 11 21 31 41 51 | | | | | | 1 PRFLVTILLI CLLVAALLIA LIAIVWALNS NSASVREPEI VYTIPSRDNQ KDNVVHARSN 60 61 IPKTLKKSLD LLEEDTTTIT TTTSQTPDDY DTTEPFVEEE EYHLEEATEH HEIATIEATT 120 121 PEPSEIATKK PIIYYSPPTT PKTTTSTGYL QFYDSIDGDA SDNCLERLAL GSPSGVYSIQ 180 181 SVEKFQAFCD MDTTTGGWTV IQRRVDGDGS FHRGTMKKFV EGFGNLQGSH WLGLEKLHNL 240 241 APIGATPAIL RIEIQGETCD LTCSKRFANT WVGEWKVNFG KKQDGYKIQI TEEGVGNLTY 300 301 NGVDPFFGAN GRRFSTNDND QDENTFMNCA QFRMVGPWWH PKSCSDVGLN GYFQTTSEKY 360 361 DVKDRNQNAK RYFVWAFDKQ IYNGYPYTIH VRKSTMLLKT GDPQR |
Detection Method: | |
Confidence: | 53.522879 |
Match: | 1m1jC |
Description: | Fibrinogen C-terminal domains; Fibrinogen gamma chain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
receptor binding | 1.9776581053362 | bayes_pls_golite062009 |
eukaryotic cell surface binding | 1.88588139563708 | bayes_pls_golite062009 |
integrin binding | 1.84403663032634 | bayes_pls_golite062009 |
carbohydrate binding | 1.60481550486624 | bayes_pls_golite062009 |
cell surface binding | 1.53370693640531 | bayes_pls_golite062009 |
binding | 0.811708735919118 | bayes_pls_golite062009 |
polysaccharide binding | 0.578727264859991 | bayes_pls_golite062009 |
glycosaminoglycan binding | 0.27731523067605 | bayes_pls_golite062009 |
protein binding | 0.249736491712423 | bayes_pls_golite062009 |
vascular endothelial growth factor receptor binding | 0.10959185189203 | bayes_pls_golite062009 |