| Protein: | odr-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for odr-7.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..150] | [446..1] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MIVPDTEGLL IYSYGLMYGS YCMACQMLIP HFQCIPGIFP NFRISTELIK TMTDKLEQPN 60
61 NNVPQQPWGP FPPAFGGRPS GEQTDGNPGE FDNDAAHQQT APFMTHFFPR IGLQFPDFTE 120
121 YQRFNGFQRN AFFPNPFGSQ FTGQAFAQSF PLHNSMTTMD GFNLTHAPHP FSTNTNSTKP 180
181 KDIENTVQST IKHSSENIQD KPPVL
|
| Detection Method: |  |
| Confidence: | 6.045757 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [206-326] |
1 11 21 31 41 51
| | | | | |
1 SVEYPVKYDS ELKFDANVDF TAVPKQESSD DSTLKNLKKS DQQLQQPQQF TFPPPLLAEK 60
61 SFEQPRMRED VLPFHPQFYP APLDMGTNFK QEMRTPPIDG HIDYRKFDAS GKRMEFQPPG 120
121 A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [327-457] |
1 11 21 31 41 51
| | | | | |
1 LHDCQVCLST HANGLHFGAR TCAACAAFFR RTISDDKRYV CKRNQRCNNA SRDGTGYRKI 60
61 CRSCRMKRCL EIGMLPENVQ HKRNRRDSGS PPRKTPFDTF FNGFYPSFQP SGSAAQPITV 120
121 SSSESPRHTT N
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 1ynwB |
| Description: | Crystal Structure of Vitmain D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element |
Matching Structure (courtesy of the PDB): |
|
