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View Structure Prediction Details

Protein: CE03424
Organism: Caenorhabditis elegans
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03424.

Description E-value Query
Range
Subject
Range
gi|157746041 - gi|157746041|ref|XP_001668117.1| Hypothetical protein CBG03980 [Caenorhabditis briggsae AF16]
gi|39595342, gi|... - gi|39595342|emb|CAE60379.1| Hypothetical protein CBG03980 [Caenorhabditis briggsae], gi|187036173|em...
235.0 [0..1] [379..21]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFQIQNHE ENNVDKIESK MLEDETDLLH ETLSTVFPNG KSIKFDSHKH HVPVILLNML  60
   61 KELFEPVLNQ LSIELIAANG KTTNTDNVLA ELAKFNEAVA LFRRDNPKKQ LLLPKHWDQS 120
  121 TCTQQVAQKI TEIAKDLSVP YPKKLNQHYK GFSSETYGET MLEQIGSIVD ELKLNSSDVF 180
  181 VDLGSGIGQL VCFVAAYSKV KKAVGIELSS VPAEYAVSQG MYFKNLMTFF DKQHGEIELI 240
  241 QGDFLHPQFH DLICKEATVI FINNYAFEDD LTRRIVFELL QNCADGTRIV SAKPLSLPRS 300
  301 VASRRHAMSD FGSMSNSRTL RATESNVSWT SNIVEFTLTT VDHLKLFKSF EMQKESKKSA 360
  361 NSKVKKVGKD FTKTSLKNKK ESK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.045757
Match: 1nw3A
Description: Catalytic, N-terminal domain of histone methyltransferase Dot1l
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle