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View Structure Prediction Details

Protein: CE03366
Organism: Caenorhabditis elegans
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03366.

Description E-value Query
Range
Subject
Range
gi|12857245 - gi|12857245|dbj|BAB30945.1| unnamed protein product [Mus musculus]
293.0 [0..4] [328..7]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDTTLGIV CAVVSAITFG STYVPLKWFH KGDGLYFQWV QSLGQLLVGV AVAMTTAPAP  60
   61 IHPIAMLSGM FYSVGNSLTV FIMDGIGLAI GYLLWNTVTC VVGWAVTRFG LFANPQQYPK 120
  121 SDWLNILGVV TVCVGGAIYA PIKHIPARVR PAPWSLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDNYKDDPLV VKEVSCTRRI LCLFLTIFVG FLYGNFLTPI NYIIANEPGS HQDVRAYILS  60
   61 YCLGSFVTST VIFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYSIVKKNVP LVNAELSMPS IISGILYGIA VTTFFMANQH LDQVIAYPIL SKAPGIIVSL  60
   61 WAIFLFKEIQ GKKDIIQLYI GIFVTLLGIA FISLSKVEF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.64
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle