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View Structure Prediction Details

Protein: CE03366
Organism: Caenorhabditis elegans
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03366.

Description E-value Query
Range
Subject
Range
gi|12857245 - gi|12857245|dbj|BAB30945.1| unnamed protein product [Mus musculus]
293.0 [0..4] [328..7]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKDTTLGIV CAVVSAITFG STYVPLKWFH KGDGLYFQWV QSLGQLLVGV AVAMTTAPAP  60
   61 IHPIAMLSGM FYSVGNSLTV FIMDGIGLAI GYLLWNTVTC VVGWAVTRFG LFANPQQYPK 120
  121 SDWLNILGVV TVCVGGAIYA PIKHIPARVR PAPWSLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDNYKDDPLV VKEVSCTRRI LCLFLTIFVG FLYGNFLTPI NYIIANEPGS HQDVRAYILS  60
   61 YCLGSFVTST VIFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYSIVKKNVP LVNAELSMPS IISGILYGIA VTTFFMANQH LDQVIAYPIL SKAPGIIVSL  60
   61 WAIFLFKEIQ GKKDIIQLYI GIFVTLLGIA FISLSKVEF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.64
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle