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View Structure Prediction Details

Protein: CE03285
Organism: Caenorhabditis elegans
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03285.

Description E-value Query
Range
Subject
Range
gi|39587201, gi|... - gi|39587201|emb|CAE57669.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae], gi|187038890|em...
gi|157749829 - gi|157749829|ref|XP_001678628.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae AF16]
413.0 [0..148] [445..6]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHTPRKLCS LFQNFQLGTR EIFFVKTTED RFHSIFLSAY KPNKFISSIF VCCNSFLLLN  60
   61 FVESFLFYKK EIRLFFLNNL STKNHQPNFL LVCRRFSLRT DVFFIVVKLE FTVYGFLRSP 120
  121 FPLSASISIF NQYYLQIQKS MFLQSATLVI ITLLPLFSGL EVRRRRSVAP FLGSGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQPTGMLISP ELWHCGSEGS TRNYTYQATV RDCPSLAAAL NHCCAIHDDC YGQQKGQEKC  60
   61 DEDFCECNRM VTRLPTEEGY KCRAAADDAC LILAVLGWSA YGDSNY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [283-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDPTKPSANV LVTPETVPKM ESDFMNLYSK CPYANITLAS CANNFDLCAV VHSVDFCAND  60
   61 LCHCMLDAAE SDDIHKKECS PAVAHTCRAV LRHSSDVLAS RSVTRNFIII ALLVLAAASV 120
  121 GFGLFFMYTR VAGERKKVEE GKYLQIHTVE SARSVNPLLL SAD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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