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View Structure Prediction Details

Protein: CE03285
Organism: Caenorhabditis elegans
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE03285.

Description E-value Query
Range
Subject
Range
gi|39587201, gi|... - gi|39587201|emb|CAE57669.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae], gi|187038890|em...
gi|157749829 - gi|157749829|ref|XP_001678628.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae AF16]
413.0 [0..148] [445..6]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHTPRKLCS LFQNFQLGTR EIFFVKTTED RFHSIFLSAY KPNKFISSIF VCCNSFLLLN  60
   61 FVESFLFYKK EIRLFFLNNL STKNHQPNFL LVCRRFSLRT DVFFIVVKLE FTVYGFLRSP 120
  121 FPLSASISIF NQYYLQIQKS MFLQSATLVI ITLLPLFSGL EVRRRRSVAP FLGSGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQPTGMLISP ELWHCGSEGS TRNYTYQATV RDCPSLAAAL NHCCAIHDDC YGQQKGQEKC  60
   61 DEDFCECNRM VTRLPTEEGY KCRAAADDAC LILAVLGWSA YGDSNY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [283-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDPTKPSANV LVTPETVPKM ESDFMNLYSK CPYANITLAS CANNFDLCAV VHSVDFCAND  60
   61 LCHCMLDAAE SDDIHKKECS PAVAHTCRAV LRHSSDVLAS RSVTRNFIII ALLVLAAASV 120
  121 GFGLFFMYTR VAGERKKVEE GKYLQIHTVE SARSVNPLLL SAD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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