| Protein: | prx-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prx-5.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..49] | [499..27] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MKGVVEGQCG QQNALVGLAN TFGTSNQRVA PSNAAASLLP SSSMGEQMAN EFLRQQARTM 60
61 APTSFSMKSM QNNLPQASAS SSLAANWTKE FQPRQNQLAS QWSQQYTSSA PSMESAWRQV 120
121 QAPSMTSTSS HQPITDAGMW SSEYLDTVDT SLTK
|
| Detection Method: |  |
| Confidence: | 12.0 |
| Match: | 1xnfA |
| Description: | Crystal structure of E.coli TPR-protein NlpI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [155-502] |
1 11 21 31 41 51
| | | | | |
1 SSGTQNWADD FMEQQDNYGM ENTWKDAQAF EQRWEEIKRD MEKDESLQSP ENYVYQEANP 60
61 FTTMSDPLME GDNLMRNGDI GNAMLAYEAA VQKDPQDARA WCKLGLAHAE NEKDQLAMQA 120
121 FQKCLQIDAG NKEALLGLSV SQANEGMENE ALHQLDKWMS SYLGSNSTQV TTTPPLYSSF 180
181 LDSDTFNRVE ARFLDAARQQ GATPDPDLQN ALGVLYNLNR NFARAVDSLK LAISKNPTDA 240
241 RLWNRLGATL ANGDHTAEAI SAYREALKLY PTYVRARYNL GISCMQLSSY DEALKHFLSA 300
301 LELQKGGNDA SGIWTTMRSA AIRTSNVPDN LLRAVERRDL AAVKASLV
|
| Detection Method: | |
| Confidence: | 31.30103 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peroxisome targeting sequence binding | 6.28836842401449 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-1 binding | 5.30441166392789 | bayes_pls_golite062009 |
| binding | 2.09193012129784 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| signal sequence binding | 1.13935627118933 | bayes_pls_golite062009 |
