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View Structure Prediction Details

Protein: CE02948
Organism: Caenorhabditis elegans
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02948.

Description E-value Query
Range
Subject
Range
sdz-3 - status:Partially_confirmed UniProt:Q18308 protein_id:AAC46821.2
277.0 [0..22] [258..39]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVVNVKVEP TIPDECGSEM PLTIQNAKKA RKRRPAKATD LTPKKTEHPQ LSFPMDQRWA  60
   61 ESTVVTNETH CLCEILTCRN CNKSHKRSRI EHVEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQCRFSWFKV SMKQPGHAKK MLSETSKLGV QVEDILHALL PSSNPNCWLH FYTFKAKSIE  60
   61 DEEKLKTAVE TNFVRGFNAE SLLGNADKSF FFHDIDMRSA LILCTIATFL KHWKI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [211-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESPLPPMDLL RDHEHFSKAL ADAKTFEILD KYVSRNGMKK LKAWDSDTLW 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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