| Protein: | clec-140 |
| Organism: | Caenorhabditis elegans |
| Length: | 241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-140.
| Description | E-value | Query Range |
Subject Range |
|
|
151.0 | [0..7] | [239..356] |
|
|
142.0 | [0..4] | [240..2] |
|
|
134.0 | [0..1] | [240..1] |
|
|
132.0 | [0..15] | [240..737] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MHFSFIFLVL VYLTFAFGDS LICNNGFTVV NSNKCLKLFS SAVKHRTAEA NCASYGGTLV 60
61 NIRNSIDNRA VTQFVGNIGL SFWIGVYCLE SNNPSSCYFD DDLGTDTAFN NFAKGFPNTD 120
121 IGGCVYSATS GSLAGQWISS ECDNVEMAYV CEIPMTRA
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [159-241] |
1 11 21 31 41 51
| | | | | |
1 DSCAHNYNGY CYIMSHENST SPILSFNDAY KSCQDNCANL VSIHSRRELS YIQGIYSPFN 60
61 ISSVTIGGLS TAPMAPYWSD LSH
|
| Detection Method: | |
| Confidence: | 3.88 |
| Match: | 2bpdA |
| Description: | No description for 2bpdA was found. |
