| Protein: | ran-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ran-5.
| Description | E-value | Query Range |
Subject Range |
|
|
246.0 | [0..2] | [339..919] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MSKGFAFKPS ALAAKADKLW SDSKTEYTAT HSTINHVHLE KKSLGDIIPK SADAPVANEK 60
61 EVEEAPQAFV FGSKISDRVV NKEGDSTKPG GSDEKTMTAT ELFQNAVKKD DDKN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [115-340] |
1 11 21 31 41 51
| | | | | |
1 GAKNFRKEAE QEAERAKEAE KQHAGTSSVE ITTGEENDTN IFQAPCKIWA FDKLKNAYSE 60
61 KGVCNLRINK RVENGLTHHR IVARTSSGTL RVIINSKIFS DMLLERVDKR IRISAMGPEI 120
121 SGVQIFLLKI GFTKTETIPD SDIFYNIMSD LLKLEKGENS RKRKADCDLN ASTVKIKDGK 180
181 EEEEGDQDQV DEGFVIVNKP TEDEVKEEKP AVTAAEESAS SSTPSE
|
| Detection Method: | |
| Confidence: | 37.0 |
| Match: | 1k5dB |
| Description: | Ran-binding protein 1, Ranbp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.5144141194236 | bayes_pls_golite062009 |
| protein binding | 1.42613583294271 | bayes_pls_golite062009 |
