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Protein Overview: ran-5

General Information:
Name(s) found: ran-5 / CE02847 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004306 locus:ran-5 status:Confirmed UniProt:Q21961 protein_id:CCD72320.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    intracellular transport [IEALink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGFAFKPS ALAAKADKLW SDSKTEYTAT HSTINHVHLE KKSLGDIIPK SADAPVANEK  60
   61 EVEEAPQAFV FGSKISDRVV NKEGDSTKPG GSDEKTMTAT ELFQNAVKKD DDKNGAKNFR 120
  121 KEAEQEAERA KEAEKQHAGT SSVEITTGEE NDTNIFQAPC KIWAFDKLKN AYSEKGVCNL 180
  181 RINKRVENGL THHRIVARTS SGTLRVIINS KIFSDMLLER VDKRIRISAM GPEISGVQIF 240
  241 LLKIGFTKTE TIPDSDIFYN IMSDLLKLEK GENSRKRKAD CDLNASTVKI KDGKEEEEGD 300
  301 QDQVDEGFVI VNKPTEDEVK EEKPAVTAAE ESASSSTPSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] deduced N/A No confident structure predictions are available.
    2 View Details [115..340] PSI-BLAST 37.0 Ran-binding protein 1, Ranbp1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.5144141194236 bayes_pls_golite062009
  • protein binding
    		•  1.42613583294271 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle