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View Structure Prediction Details

Protein: CE02681
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02681.

Description E-value Query
Range
Subject
Range
gi|39591536, gi|... - gi|39591536|emb|CAE71112.1| Hypothetical protein CBG17965 [Caenorhabditis briggsae], gi|187025031|em...
gi|157775105 - gi|157775105|ref|XP_001665618.1| hypothetical protein CBG17965 [Caenorhabditis briggsae AF16]
442.0 [0..1] [451..198]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEIKVKSM RSVGTQVDVQ CITYGLAGFD SVFKHCGVFS GEEHNVSSIW KGPVRMVERK  60
   61 TETESFEISQ YGETVFKPSL QLLVGTSDEI AFSLLRHVFS KMDIIELRHY LQVLGF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTFNLMYNL GEEFIEGEIP VDERILLDEI EALESFTVSN MTIEEEIEAR RVERLALKFV  60
   61 EEMYNPDTEN DEQIALLLHS EMNDENGDND LIEEDYFNIA NLEESFPGTN KKVVREAYNI 120
  121 AGRKVDFTRE ILLSNGEVEN TYAVKLKPKP TWSKKVASSP S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [278-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLRLSLPKKS KKEEENHFLK KRSGRHSQLE EIQLLAIRTR QKIEADRITS SNSMAAAKYR  60
   61 QLIIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [343-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRASRMKIEK SSEVKELDRK IREAHNNPWF LDLHYMSVDG AVKLVKEAIE AVKYHLKAAR  60
   61 NLDRRITVVT GSGNNSKCGA KIKPQVLAML QHNDYNYELV NDGCIRFKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2d9iA
Description: No description for 2d9iA was found.

Predicted functions:

Term Confidence Notes
binding 0.516543741233519 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle