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View Structure Prediction Details

Protein: CE02681
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02681.

Description E-value Query
Range
Subject
Range
gi|39591536, gi|... - gi|39591536|emb|CAE71112.1| Hypothetical protein CBG17965 [Caenorhabditis briggsae], gi|187025031|em...
gi|157775105 - gi|157775105|ref|XP_001665618.1| hypothetical protein CBG17965 [Caenorhabditis briggsae AF16]
442.0 [0..1] [451..198]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEIKVKSM RSVGTQVDVQ CITYGLAGFD SVFKHCGVFS GEEHNVSSIW KGPVRMVERK  60
   61 TETESFEISQ YGETVFKPSL QLLVGTSDEI AFSLLRHVFS KMDIIELRHY LQVLGF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTFNLMYNL GEEFIEGEIP VDERILLDEI EALESFTVSN MTIEEEIEAR RVERLALKFV  60
   61 EEMYNPDTEN DEQIALLLHS EMNDENGDND LIEEDYFNIA NLEESFPGTN KKVVREAYNI 120
  121 AGRKVDFTRE ILLSNGEVEN TYAVKLKPKP TWSKKVASSP S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [278-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLRLSLPKKS KKEEENHFLK KRSGRHSQLE EIQLLAIRTR QKIEADRITS SNSMAAAKYR  60
   61 QLIIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [343-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRASRMKIEK SSEVKELDRK IREAHNNPWF LDLHYMSVDG AVKLVKEAIE AVKYHLKAAR  60
   61 NLDRRITVVT GSGNNSKCGA KIKPQVLAML QHNDYNYELV NDGCIRFKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 2d9iA
Description: No description for 2d9iA was found.

Predicted functions:

Term Confidence Notes
binding 0.516543741233519 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle