| Protein: | ifb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ifb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..5] | [587..383] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MSSHKESSEY EMQYRSTIQP RTAVRSQSRQ SGNYVSGGNG AGSGGRVLKM VTEMGSATVG 60
61 GISPALSANA AKSFLEATDK EKKTLQGLND RLGNYIDRVK KLEEQNRKLV ADLDELRGKW 120
121 GKDTSEIKIK YS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [133-495] |
1 11 21 31 41 51
| | | | | |
1 ESLSTARKDI DDAARRKAEV DVKVARHRDD LAEYRSRYED IQQRRESDRE KISQWTNAIA 60
61 DAQSEVEMLR ARFKQLTDEE KRVTADNSRI WEELQKARSD LDDETIGRID FQNQVQTLME 120
121 ELEFLRRVHE QEVKELQALL AQAPADTREF FKNELALAIR DIKDEYDIIA KQGKQDMESW 180
181 YKLKVSEVQG SANRANMEST YQRDEVKRMR DNIGDLRGKL GDLENKNSLL EKEVQNLNYQ 240
241 LTDDQRQYEA ALNDRDATLR RMREECQTLV AELQALLDTK QMLDAEIAIY RKMLEGEETR 300
301 VGLTQMVEQA VKTHSLQQQE NTDSTRSVRG EVSTKTTFQR SAKGNVTISE CDPNGKFIKL 360
361 ENS
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [496-589] |
1 11 21 31 41 51
| | | | | |
1 HRNKDENVGE HKIRRKLDGR REIVYSIPAN VVIKPGKNLT IYARDQGGIN NPPESLVFDG 60
61 ENTWGIGANV VTSLVNKDGE ERATHTQKTI QSGQ
|
| Detection Method: | |
| Confidence: | 26.0 |
| Match: | 1ivtA |
| Description: | Lamin A/C globular tail domain |
Matching Structure (courtesy of the PDB): |
|
