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View Structure Prediction Details

Protein: CE02610
Organism: Caenorhabditis elegans
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02610.

Description E-value Query
Range
Subject
Range
gi|39596860, gi|... - gi|39596860|emb|CAE59087.1| Hypothetical protein CBG02379 [Caenorhabditis briggsae], gi|187037463|em...
gi|157752182 - gi|157752182|ref|XP_001679803.1| Hypothetical protein CBG02379 [Caenorhabditis briggsae AF16]
266.0 [0..1] [303..1]

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Predicted Domain #1
Region A:
Residues: [1-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIVPTLFS FVRDTYKGRF DVATFEREVG RDFDNQEIAQ AISKYEQEAK NLRNKDEIRK  60
   61 VIQYIDLTTL NGDDTASKVV ALAKRAINPV PTDPSIHCGS VCVYPQRIAD VKKFLASSKL 120
  121 NSNITSVAGG FPSGQYHLKS KVLEVELSVA DGATEIDIVI SRASALDEDW KTVHDEVLAC 180
  181 KKACGSAHLK TILATGELKT LSNVYRASWA SILAGSDFIK TSTGKESVNA TLEVAYVMCT 240
  241 AIKRWHELTG KKVGFKPAGG IKTVDEALSY VALVKDILGD EWLNPHLFRI GASSLLDDCL 300
  301 KGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.221849
Match: 1jclA
Description: Deoxyribose-phosphate aldolase DeoC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.67031204377352 bayes_pls_golite062009
deoxyribose-phosphate aldolase activity 2.42732299324236 bayes_pls_golite062009
kinase activity 1.94076427145239 bayes_pls_golite062009
fructose-bisphosphate aldolase activity 1.57588823292155 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 1.53236719840557 bayes_pls_golite062009
transaldolase activity 1.20024248197006 bayes_pls_golite062009
transferase activity 0.464721888799972 bayes_pls_golite062009
aldehyde-lyase activity 0.351872954170322 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle