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View Structure Prediction Details

Protein: dnc-2
Organism: Caenorhabditis elegans
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnc-2.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
137.0 [0..21] [328..2497]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIGKEDIY ESDGAASQVQ KSEPENDNPT HPDIELISVD VDEALKKYKN RVLNLTSSDF  60
   61 SDSIAKKRRH AFGNNQYVLE VTGAGFSGTE TAAEKLNRIL YEVADLNEQI RADENLKTDL 120
  121 LNAEVLENLE KEVKTLQVAQ SNGKTARVEH DVELPNVRTD SKVATLENRL RRIEQVIGSS 180
  181 VIPSAPVLDT IEDLKLRCET LNHSYVSGLE QRLNMMLTKL EKIDETRANN DIDENLDKKV 240
  241 DEILELMQKW DVACSSLPSN VNKVKALNRL HEQVQHFAGG LSHLKTIREK LEKEVAQGRE 300
  301 AIIEYESQGK QEIGSVVEKL KLLEAKVADL K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle