| Protein: | CE01499 |
| Organism: | Caenorhabditis elegans |
| Length: | 253 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01499.
| Description | E-value | Query Range |
Subject Range |
|
|
324.0 | [0..1] | [253..1] |
|
|
270.0 | [0..1] | [252..1] |
|
|
251.0 | [0..1] | [212..1] |
|
|
229.0 | [0..1] | [192..1] |
|
|
226.0 | [0..1] | [192..1] |
|
|
226.0 | [0..1] | [192..1] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MVFFSCNNCG EACKKNQVER HLFQCRNTTF SCIDCQLVYT RETYKDHVKC ITENQKYGGK 60
61 NYVEKEN
|
| Detection Method: |  |
| Confidence: | 27.522879 |
| Match: | 1wjvA |
| Description: | Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [68-253] |
1 11 21 31 41 51
| | | | | |
1 KGEAKQNAWV DQVNRAIEFV TDSQVKELLK SVAGFANIPR KEAKFINFLT NSCRLRDKNL 60
61 ALRAWQAIAA EADKMREEAI RKQEETQKME KAQKEAAAAA KKETTVATTA AEVTDAPEST 120
121 FKWKKVIKRK LKENGGEMKI KKLKKAIIEE LSAAGAASDD VDSIFDEKLQ KCAAVTVDGK 180
181 KVSLVV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
