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View Structure Prediction Details

Protein: CE01031
Organism: Caenorhabditis elegans
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01031.

Description E-value Query
Range
Subject
Range
gi|57048078 - gi|57048078|ref|XP_536255.1| PREDICTED: similar to lipoic acid synthetase isoform 1 precursor isofor...
309.0 [0..7] [353..25]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLARVWVRGL AATKKKPQVL VKDGPSLQDF ISSASVAEAV EKYEGKLKLE KG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [53-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRRLRLPPWL KKEKILPSEN ENVSRLKKQL KHLKLATVCQ EARCPNLGEC WGGSDDSLAT  60
   61 ATIMLMGDTC TRGCKFCSVK TARAPPPLDP MEPENTSTAV ASWGVEYIVL TSVDRDDLPD 120
  121 GGADHLRKTV QLMKLKKPEL LIECLLPDFA GDKISVEKMA TSGLDVYAHN IETVERLTPW 180
  181 VRDPRAKYRQ SLDALRYAKE VSPKLITKTS IMLGLGEAED EIKQCLADLR ASNVDVVTFG 240
  241 QYMQPTKRHL LVKEWVTPEK FDQWAEYSKK LGFLYVASGP LVRSSYKAGE FYLKNVLRNR 300
  301 QN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1r30A
Description: The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
sulfurtransferase activity 2.16438226990481 bayes_pls_golite062009
biotin synthase activity 2.08611410724267 bayes_pls_golite062009
coproporphyrinogen oxidase activity 1.98937742831419 bayes_pls_golite062009
radical SAM enzyme activity 1.93582371651697 bayes_pls_golite062009
catalytic activity 1.48331922124015 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.37188743230327 bayes_pls_golite062009
transferase activity, transferring sulfur-containing groups 1.13381681474815 bayes_pls_golite062009
binding 0.998331252589966 bayes_pls_golite062009
oxidoreductase activity 0.593156857804038 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 0.48341859452689 bayes_pls_golite062009
protein binding 0.274298596808905 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle