| Protein: | clec-153 |
| Organism: | Caenorhabditis elegans |
| Length: | 580 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-153.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..3] | [580..671] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MRIKIFMIIC LLHKTNAQLA RDWSFQEMCN FWGGEKTYHA RKDGFKSLEG DKCTFNFPKA 60
61 SNNQESAQQY CEDNVPYHIN NAEASEYKTT CEAEATLICK SGWVQMFGRC YKITKTMMTR 120
121 DKAEEHCKNQ QDHTSTIAFM HREALPFRWN DYFTRVSRIW MDASKVITND LIYDIEDGNV 180
181 LLAFDGYKYN LPNVAIARVP KDETAMVLCE YTPPMTKSES NYLLRRYGEI YYPPLVTS
|
| Detection Method: |  |
| Confidence: | 24.39794 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [239-351] |
1 11 21 31 41 51
| | | | | |
1 ESVYMSTTSS RIRDETDQFA DNKYCTNVMR PIFRGLAARS AFPTKEFVDK LEKEAAIIRS 60
61 ATVSQSANQK GREESECVVN QKPIHQVFAS GQGGKTLNVK IDQALWRKGE PKE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [352-580] |
1 11 21 31 41 51
| | | | | |
1 TCDAASWSSA IVLSRDGEKG LETMSDARYA PIYCEAILDK YEYGPCPAGF LQYDRTELGI 60
61 RWCHKLYSEL ETTYDDAEKE CLSLGAHVSG FSDLKEKDFM HDMIMASPIK NKTFNRVWIG 120
121 AQRRPECNTL GVEGKTGGFD TDDSKPCARS RVFYWLHGVA LNPPDFIEHW ADPNEPNFLG 180
181 DKEKCVVVMT GSEWTHWKFG INKKINDVSC GRRYPFFCGK EAPIVKVTK
|
| Detection Method: | |
| Confidence: | 5.23 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
| Matching Structure (courtesy of the PDB): |
|
