| Protein: | clec-151 |
| Organism: | Caenorhabditis elegans |
| Length: | 628 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-151.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..7] | [624..671] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MPSRTNSVPT SNRYKKSEFN NFSRVNQKLI SDSSHLQNAF ENFHALSLLC YTNAQVDRDW 60
61 SFQQMCEFWG GEQTYRARSG YKSIEGDKCT FKFPKASNNK ESAQRYCEET VPYHINNPKA 120
121 SEYKTTCEAE ATL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [134-382] |
1 11 21 31 41 51
| | | | | |
1 ICKSGWVQMF GRCYKITKTM MTRDKAEEHC KNQQDQTSTI AFMHREALPF RWNDYFTRVS 60
61 RIWMDASEVV TNDLIHDVEG GNVLLAFDGY KYNLPNVAIA RVSKNETAMV LCEYTPSMTK 120
121 AESNYLLRRY GEIYYPPLVT SESAYMRTTS SRIRNEEDPL ADHNYCTELM KPVFRGGEAQ 180
181 SALPTQEFVK KLTETGAAEI IRTSSVSMNA NKGERTIVDC VSHVDPYHRV HVKGDKNEET 240
241 SITLNKTIW
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-628] |
1 11 21 31 41 51
| | | | | |
1 RQQEPHETCD AATWSSAAVL SRDSNRGLEA MSDARYAPLY CENILEYFSY SKCPEGFSEF 60
61 PRVTSGQRWC HKYVHGAPLP YDDAEKKCAE MGAHLSGFTT QEEFKFLNEL VNKEYPNKND 120
121 IEVWLGAQRK MSCPDAGKNF NGGFSTNEFD NCARSRVFEW RNGVAKNPPD FIGSGYDNWA 180
181 ELDEPNHLSD KERCVVMMHG KITKYWGYSS KYHDRRDMQI NDIFCDWHFE YFCGLEVPVI 240
241 TVKKSS
|
| Detection Method: | |
| Confidence: | 5.46 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.06958593058971 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0461189069801637 | bayes_pls_golite062009 |
| protein binding | 0.02015733731384 | bayes_pls_golite062009 |
