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View Structure Prediction Details

Protein: CE00893
Organism: Caenorhabditis elegans
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00893.

Description E-value Query
Range
Subject
Range
gi|39596168, gi|... - gi|39596168|emb|CAE69805.1| Hypothetical protein CBG16115 [Caenorhabditis briggsae], gi|187026696|em...
gi|157767500 - gi|157767500|ref|XP_001667230.1| Hypothetical protein CBG16115 [Caenorhabditis briggsae AF16]
127.0 [0..9] [98..7]
CE05649 - status:Confirmed UniProt:Q19513 protein_id:CAA96624.1
115.0 [0..10] [98..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISFIKATIL VGLVAFLACQ NSQVGAASSL MPNVCNAGEE TAMPCVCCKK ACWFGIAEMT  60
   61 TAYFGHMPGE RSDAEAKFTL AMMNQCFKLE CNETCATAH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle