| Protein: | CE00268 |
| Organism: | Caenorhabditis elegans |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00268.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..1] | [351..1] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MGKFSKIKKV QEEESAHQKM EWEAAGAKDS SSDDSSDESD NDDQPKQATE ETRKRAELWT 60
61 NRERVLVLCS RGADVRTRYL MKDIKDLLPH AKGDSKLDQQ KSLNVLNEIA EMKNCTKVMY 120
121 FESRKRKDTY LWMSNVEKGP SIKFLVHNVH TMKELKMSGN CLRASRPVLS FDD
|
| Detection Method: |  |
| Confidence: | 11.0 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.87211694771248 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity | 2.64230127203047 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.73857064375258 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.358563180490135 | bayes_pls_golite062009 |
|
Region A: Residues: [174-262] |
1 11 21 31 41 51
| | | | | |
1 AFDKKPQLKL IKAVLMQTLG TPHHHPRSQP FVDHVFNFSV GEGDKIWFRN FQIVDESLQL 60
61 QEVGPRFVLE MVRLFAGSFE GAVLYDNPN
|
| Detection Method: | |
| Confidence: | 1.46 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [263-352] |
1 11 21 31 41 51
| | | | | |
1 YVSPNVIRRE HRKGQHSYIE KQLAVKASNI KQAKVTEILA EKTVDLVGKE FDTQNNAAAD 60
61 SEAAAQITAQ IEKRRVRKKK SQASKYTGSD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
