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View Structure Prediction Details

Protein: CE00231
Organism: Caenorhabditis elegans
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00231.

Description E-value Query
Range
Subject
Range
gi|50731830 - gi|50731830|ref|XP_418377.1| PREDICTED: similar to dihydropyrimidinase [Gallus gallus]
244.0 [0..17] [417..2]

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Predicted Domain #1
Region A:
Residues: [1-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPRKLKIDS TELAEITNEL VQFLNCLVLR SGGLKKEHIW VRNGRILDER TVFFEEKTMA  60
   61 DVQIDCEGLI LSPGFIDLQL NGGFGIDFST YNSDDKEYQE GLALVAKQLL AHGVTSFSPT 120
  121 VITSSPETYH KILPLLKPSN ASSEGAGNLG AHLEGPFISA DKRGCHPEQL VITSLSPNPV 180
  181 EIIEHVYGST ENIAIVTMAP ELEGAQEAIE YFVSTGTTVS VGHSSAKLGP GEMAVLSGAK 240
  241 MITHLFNAMQ SYHHRDPGLI GLLTSSKLTP DHPLYYGIIS DGIHTHDSAL RIAYHTNSAG 300
  301 LVLVTDAIAA LGMSDGVHKL GTQTIHVKGL EAKLDGTNTT AGSVASMPYC IRHLMKATGC 360
  361 PIEFALQSAT HKPATLLGVS DEKGTLDVGR LADFVLIDKN VTVKATFCSG KRVFLAQD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 1ymyA
Description: Crystal Structure of the N-Acetylglucosamine-6-phosphate deacetylase from Escherichia coli K12
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.00269452684807 bayes_pls_golite062009
N-acetylglucosamine-6-phosphate deacetylase activity 1.87049065683349 bayes_pls_golite062009
deaminase activity 1.75073958887958 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle