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View Structure Prediction Details

Protein: gi|630639
Organism: Caenorhabditis elegans
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|630639.

Description E-value Query
Range
Subject
Range
zfp-1 - status:Confirmed UniProt:P34449 protein_id:AAK26139.1
399.0 [0..1] [204..8]
gi|157776005 - gi|157776005|ref|XP_001666068.1| hypothetical protein CBG06896 [Caenorhabditis briggsae AF16]
gi|187033833, gi... - gi|39585083|emb|CAE62734.1| Hypothetical protein CBG06896 [Caenorhabditis briggsae], gi|187033833|em...
158.0 [0..103] [196..83]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLIDISLFL LLGTLIVACT VKKEKIKERH NHNRTLLKRT VGGKRKDTGH RHRTSTIPPR  60
   61 DKSSLHAPTV KNGNSLSAVE PNGRIKIGYR LSPSVK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGEIVAPKAT VTPAVNTRKP INEAISEGII LDPTYFKNGG NLDSKSPKNQ KLAEELQQFI  60
   61 DNPGLGSNET STLTDDNDVP RVVAVPSQCK MFETTNQPTN SQLLLNSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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