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View Structure Prediction Details

Protein: aar2
Organism: Schizosaccharomyces pombe
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aar2.

Description E-value Query
Range
Subject
Range
CT04_MOUSE, CT00... - (Q9D2V5) Protein c20orf4 homolog, Uncharacterized protein C20orf4 homolog OS=Mus musculus PE=2 SV=2
387.0 [0..2] [306..20]
C20orf4 - chromosome 20 open reading frame 4
383.0 [0..2] [306..20]
gi|114681744, gi... - gi|114681744|ref|XP_001166196.1| PREDICTED: similar to C20orf4 isoform 4 [Pan troglodytes], gi|11468...
383.0 [0..2] [306..20]
gi|109471180, gi... - gi|34860266|ref|XP_215901.2| PREDICTED: similar to Protein C20orf4 homolog [Rattus norvegicus], gi|1...
381.0 [0..2] [306..20]
AAR2_MACFA - Protein AAR2 homolog OS=Macaca fascicularis GN=AAR2 PE=2 SV=1
379.0 [0..2] [306..20]
AAR2_PONAB - Protein AAR2 homolog OS=Pongo abelii GN=AAR2 PE=2 SV=1
CT004_PONPY - Uncharacterized protein C20orf4 homolog - Pongo pygmaeus (Orangutan)
377.0 [0..2] [306..20]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIEFVGWLN TYYVGIDQSS YEASKLPGIR NVKGGIHLFT WSPTYPAGLI SGVFAMVHED  60
   61 MKYSIDFDSK SETASLQKLD VLYDENFYPF ESTKDWDLLT KFITVQDLQR IF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.589 0.546 nucleus a.4.5 "Winged helix" DNA-binding domain
View Download 0.469 0.077 nucleus a.29.2 Bromodomain
View Download 0.417 0.041 nucleus c.55.3 Ribonuclease H-like
View Download 0.435 0.006 molecular_function c.23.1 CheY-like
View Download 0.444 N/A N/A c.55.5 MTH1175-like

Predicted Domain #2
Region A:
Residues: [113-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATEGEFFYLD TSTYVNADLV SQDPEFSKPS RDDKLLNFAE FNLRRSWSPS ATGPERSKQA  60
   61 IDKSFLFQRL VQSVWNDNPI SALAELSISF LSYSILSHYG ALEHWKNMLS LLLQSYELAE 120
  121 TEPEFYASFL ELFKLQLSSL SESDLETSAI FEKGVLLSCL DSLSERKVDG SFGSLVNEAI 180
  181 ENLLKTISEL LNSHEEQAGL MQKGDLYSAA DYEAEVHETG DYVIDVSTEE DPIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle