| Protein: | SPCC1840.08c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 561 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1840.08c.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..102] | [498..209] |
|
|
255.0 | [0..18] | [489..166] |
|
|
252.0 | [0..102] | [498..61] |
|
|
251.0 | [0..101] | [498..25] |
|
|
246.0 | [0..102] | [498..27] |
|
|
245.0 | [0..102] | [498..27] |
|
|
245.0 | [0..102] | [498..27] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MELGAWRSIL YIAFLFAITR HAFCKAVNLV HSPEGEEFEN ILSSVSATVE KKEVNNKLIM 60
61 PTANRDNQGV REELLVSSFK ERKLLNTNSA NLRLNS
|
| Detection Method: |  |
| Confidence: | 8.0 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.00357390808173 | bayes_pls_golite062009 |
| protein binding | 1.5095461875158 | bayes_pls_golite062009 |
| transporter activity | 0.891062661562858 | bayes_pls_golite062009 |
| protein transporter activity | 0.619500680502806 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.491842023249737 | bayes_pls_golite062009 |
| unfolded protein binding | 0.26936882742456 | bayes_pls_golite062009 |
| signal recognition particle binding | 0.24222095802271 | bayes_pls_golite062009 |
| heat shock protein binding | 0.162050450070629 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
|
Region A: Residues: [97-561] |
1 11 21 31 41 51
| | | | | |
1 IGSYEMIDFK QINSEFFLSH RQHGFVLFID SKKKPRQSFY TDSATSIVQL SKKYRNKIKF 60
61 KSVDCASSLE KCEEIGINSF PSLVYYNNAG QKKVFTAHTP YEVLSKHADL ITELDETDGK 120
121 VYPQSIIRLE EFKNLKANEP VFFLYLHDYG STPEDFDSLR IFARYLVGFA PLYRTDDEKV 180
181 IKTLNVTRLP HLVAIRHGVA FSYSERSVSA MRNTFQLIKW ASLLKYPLVP ELTPAVVENL 240
241 DSDSYLAIAL INPTSQVKAS KAISTVQEIG LKWTLKLREV ERKQLLTARE KWWDHLRMLK 300
301 QKGYDDVAFL AAEYSLPLPK NKKVTFVWVN SLQWKTWISH TFHIDPMGPS RFVLMDPSRM 360
361 FYWDSSAKGL PLTLDDSSLI LDTTFRVLAI TGEGLPHEFS IPRGYVYLSE IKQYSSLILI 420
421 SLWISLILFV SFLNRRLILH YSFESVHQLK TLTRKFIYSS LLKQD
|
| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 2b5eA |
| Description: | Crystal Structure of Yeast Protein Disulfide Isomerase |
Matching Structure (courtesy of the PDB): |
|
