| Protein: | rtt109 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 369 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rtt109.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..3] | [261..10] |
|
|
356.0 | [0..3] | [318..31] |
|
|
349.0 | [0..3] | [261..10] |
|
|
347.0 | [0..5] | [261..418] |
|
|
342.0 | [0..6] | [261..307] |
|
|
329.0 | [0..3] | [368..5] |
|
|
323.0 | [0..5] | [289..26] |
|
|
322.0 | [0..5] | [261..45] |
|
|
269.0 | [0..5] | [261..10] |
|
|
260.0 | [0..4] | [261..13] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MPDLWSESIL EGRKLSIYHL KSTLEKCPFL FGQSKKSKDF QFGSHLFLVE EQNVFIFGME 60
61 CIVYEKNKEF IVFVSKADST GFGSK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.578 | d.200.1 | Integrin beta tail domain |
| View | Download | 0.578 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.512 | d.24.1 | Pili subunits |
| View | Download | 0.503 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.497 | d.266.1 | Description not found. |
| View | Download | 0.489 | d.145.1 | FAD-binding domain |
| View | Download | 0.455 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.453 | d.58.49 | YajQ-like |
| View | Download | 0.416 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
|
Region A: Residues: [86-267] |
1 11 21 31 41 51
| | | | | |
1 GVSCNSLAFC CLVTLIDGLR KQGAENVTLT LFAIAQGQYL FPESVDNGQK HVLNDSGLLR 60
61 WWVNCLEKLR KYYTDSEAPN DSEKQKNSTL LPKAYLFVPG LENIRSYLPN RHWIESNAIT 120
121 TGKAVEELPR FPDDPKCRYL CELQDEKSDM SVEEFWDTLT YRQECSSGKL VGFFTLQLQF 180
181 YQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [268-369] |
1 11 21 31 41 51
| | | | | |
1 TREFIAKDNF GDSGVMIPAK LYRVTYDTLL KHPFGSLSDA QSSTEKFLSN TLSAVQNLKD 60
61 FHYKRYKLDI CGLAKRDDRK NHNHSKPATQ ANILQPRKKV KK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.821 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.819 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.773 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.767 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.749 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.709 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.684 | a.29.8 | Description not found. |
| View | Download | 0.683 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.590 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.541 | a.25.1 | Ferritin-like |
