YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC21C3.03
Organism:	Schizosaccharomyces pombe
Length:	674 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC21C3.03.

Description	E-value	Query Range	Subject Range
gi\|186463273, gi... - gi\|23130618\|ref\|ZP_00112431.1\| COG0661: Predicted unusual protein kinase [Nostoc punctiforme PCC 731...	335.0	[0..114]	[669..16]
gi\|17232007, gi\|... - gi\|17232007\|ref\|NP_488555.1\| hypothetical protein alr4515 [Nostoc sp. PCC 7120], gi\|17133651\|dbj\|BAB... gi\|25329173 - pir\|\|AC2370 hypothetical protein alr4515 [imported] - Nostoc sp. (strain PCC 7120)	335.0	[0..115]	[669..33]
gi\|75703312, gi\|... - gi\|75909587\|ref\|YP_323883.1\| hypothetical protein Ava_3381 [Anabaena variabilis ATCC 29413], gi\|7570...	333.0	[0..115]	[669..22]
UBIB_RALSO - Probable ubiquinone biosynthesis protein ubiB OS=Ralstonia solanacearum GN=ubiB PE=3 SV=1 UBIB_RALSO - Probable protein kinase UbiB OS=Ralstonia solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1	319.0	[0..124]	[666..1]
gi\|71909480, gi\|... - gi\|71909480\|ref\|YP_287067.1\| putative ubiquinone biosynthesis protein UbiB [Dechloromonas aromatica ...	316.0	[0..126]	[672..2]
gi\|67098988, gi\|... - gi\|67667424\|ref\|ZP_00464647.1\| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia HI2424], g... gi\|170734091, gi... - gi\|170734091\|ref\|YP_001766038.1\| putative ubiquinone biosynthesis protein UbiB [Burkholderia cenocep... gi\|206559269, gi... - gi\|206559269\|ref\|YP_002230030.1\| putative ubiquinone biosynthesis protein UbiB [Burkholderia cenocep... gi\|105893853, gi... - gi\|67658632\|ref\|ZP_00456002.1\| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia AU 1054], ...	313.0	[0..126]	[662..2]
gi\|254251435, gi... - gi\|84362922\|ref\|ZP_00987533.1\| COG0661: Predicted unusual protein kinase [Burkholderia dolosa AUO158...	313.0	[0..126]	[662..2]
gi\|83652413, gi\|... - gi\|83718588\|ref\|YP_441113.1\| putative ubiquinone biosynthesis protein UbiB [Burkholderia thailandens... gi\|167617938 - gi\|167617938\|ref\|ZP_02386569.1\| putative ubiquinone biosynthesis protein UbiB [Burkholderia thailand...	313.0	[0..126]	[661..2]
gi\|194558224, gi... - gi\|84355662\|ref\|ZP_00980537.1\| COG0661: Predicted unusual protein kinase [Burkholderia cenocepacia P...	313.0	[0..126]	[662..2]
gi\|67531504, gi\|... - gi\|67547185\|ref\|ZP_00425091.1\| 2-polyprenylphenol 6-hydroxylase [Burkholderia vietnamiensis G4], gi\|...	312.0	[0..126]	[667..2]

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Predicted Domain #1

Region A:
Residues: [1-585]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSANSRFA FIIQRNYIPV VNSQNTRWKR LCGTQSVWSP YKKKHVLVNR LKHISLFPKP  60
   61 IFARKFTTRQ KSEDQKQWRI LRITFLVLPF TVGGLWILYR VKNRKNNIFS FDELELEERS 120
  121 NRPRSIFGKI KQFFNILLRS FNLFIIFSPI IITLPFIALI SFLHLRSLSS LTVSIWLRFL 180
  181 VTQLERAGAT FIKLGQWAAS RTDLFPPAFC KTLSKLHSHV TPHSLAYTQS VICKTYKVES 240
  241 IEEIFVNFNP IPIGVGAIAQ VYTATIKKAA TQQDNSYFTS MLQSIGFRQK NISDAPVTQD 300
  301 VAIKVLHPNV EKYISLDLQI LGFFAKLINL VPSMKWLSLP DEVKVFGAML NQQLNLHYEA 360
  361 LHLNQFRLNF RGNRYVEFPA PYDDYTTNQI LLEDYMPGIP LSAFLKHKSG PFNKLLANTG 420
  421 NNALFQMLIV DNFTHADLHP GNVLVKFYKG IPKTIFNQDN EINDSIYKIL STCSTEEWDS 480
  481 AMEELNILGY RPTLVFLDAG LVTKLSTQDQ KNFLDLFQAV LTFHGYEAGL LMVERSRQTE 540
  541 RVINKDIFAL KMEHLLNEIQ KSTLSLKSLQ IGTILQEVMT MAREH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.0
Match:	2h8hA
Description:	No description for 2h8hA was found.

Predicted functions:

Term	Confidence	Notes
kinase activity	1.53510615272635	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	1.52597476013849	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.45211613252961	bayes_pls_golite062009
protein kinase activity	1.42061676948467	bayes_pls_golite062009
catalytic activity	1.21655087018101	bayes_pls_golite062009
protein serine/threonine kinase activity	1.15063776398104	bayes_pls_golite062009
transferase activity	1.09650209608069	bayes_pls_golite062009
molecular adaptor activity	0.184671694302133	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [586-674]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVRIEANFAN TVLSILLVEG AGRQLYPEMD LLSNATPYLR SASSKSNVSL TNPMVQLWIA  60
   61 LEARQFLLLS TSKETVEKWV KSDMIAPNI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: