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View Structure Prediction Details

Protein: SPCC297.05
Organism: Schizosaccharomyces pombe
Length: 973 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC297.05.

Description E-value Query
Range
Subject
Range
gi|49094050, gi|... - gi|67528302|ref|XP_661953.1| hypothetical protein AN4349.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
837.0 [0..95] [957..170]
gi|46123813, gi|... - gi|46123813|ref|XP_386460.1| hypothetical protein FG06284.1 [Gibberella zeae PH-1], gi|42550831|gb|E...
828.0 [0..93] [963..168]
gi|39973495, gi|... - gi|39973495|ref|XP_368138.1| hypothetical protein MG01106.4 [Magnaporthe grisea 70-15], gb|EAA49448....
811.0 [0..97] [965..153]
gi|32415237, gi|... - gi|9368957|emb|CAB99187.1| conserved hypothetical protein [Neurospora crassa], gi|32415237|ref|XP_32...
gi|85082210 - gi|85082210|ref|XP_956865.1| hypothetical protein NCU01659 [Neurospora crassa OR74A]
808.0 [0..93] [969..221]
gi|66849812, gi|... - gi|70994802|ref|XP_752178.1| dDENN domain protein [Aspergillus fumigatus Af293], gi|66849812|gb|EAL9...
gi|159124908 - gi|159124908|gb|EDP50025.1| dDENN domain protein [Aspergillus fumigatus A1163]
796.0 [0..95] [965..155]
gi|116204865, gi... - gi|88176444|gb|EAQ83912.1| hypothetical protein CHGG_10316 [Chaetomium globosum CBS 148.51], gi|1162...
777.0 [0..96] [965..178]
gi|83769298 - gi|83769298|dbj|BAE59435.1| unnamed protein product [Aspergillus oryzae]
gi|169773937 - gi|169773937|ref|XP_001821437.1| hypothetical protein [Aspergillus oryzae RIB40]
774.0 [0..95] [960..160]
gi|114192949, gi... - gi|115398333|ref|XP_001214758.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
759.0 [0..95] [960..159]
gi|119188239, gi... - gi|90303512|gb|EAS33143.1| hypothetical protein CIMG_04167 [Coccidioides immitis RS], gi|119188239|r...
721.0 [0..52] [956..91]
gi|111066665 - gi|111066665|gb|EAT87785.1| hypothetical protein SNOG_05394 [Phaeosphaeria nodorum SN15]
661.0 [0..91] [965..153]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIADHFFL AGLSNGFVSV SNSQFRADRL DEDAISVSSS IIQNNTRKSP LKRVSITSES  60
   61 SFYKENTFAH HNTTGSNSVG PKKPFLDYHH STSNTPTKKK KDSFDHASVT SLHRRSLSSN 120
  121 TSTPRKYHSR KPYSEPSVID KEHLQNRVSI GTTHTQNDLY QSYVAYPDAL P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFAATHPFER RYPPSLLHQF PSSKDIKNET PTIDRCDFPN YVPMFAFPND ITIKESDVRP  60
   61 VSTYHSFALT SDNNSHLYGI CVVVWVAMPQ SMQNDLEKEC EVWRANNTTV EDREVAEKLL 120
  121 SSLETERSKL SSLLLKMQEK ELEGSDSIDP ILLEKIDVCE ENIILYTELL RPM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [345-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RYKLPRFVHG LTNNRTLWIP NAYGLLSKHS HLQSFCRDWL RIVCSSIQAE DLDFIPSSDL  60
   61 NSLKSLNLQS FVKNICCDVP LPPKGLLQLQ VNVGPLNLYA FRSPVNEIPG WNDVDLYPLF 120
  121 RALSIPNILV LFEAALMEAK VIFLSENLGM LGYASQALLH LLYPLTWQGL YIPVLPRRLI 180
  181 SCFEAPCSYI IGTLSYFFHM DDVPLDNIPL VVCDLDKNSV STFG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 92.769551
Match: PF02141.12
Description: No description for PF02141.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [569-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIVRLSRSLR SKLQAHLKLA APLHDKFYVP HSPPKYTMET YPNNVLSLST VTCFPLREKF  60
   61 SIPALLSFRS SNFSKRPYVL SPILNGFLKL QD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [661-720]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPSSIYFAKQ TDSRQSSASK LLYARLQAPE HARNFSSPPF TRPASPSSSK FRFSSSSFQS  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [721-823]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIRRNSLTSP YSVPELRSSE SNQNKAGSIN TGSAVNLVSS KPGEQKVHIM YKEGHKLRRI  60
   61 YKMFPADSAG SICAVSGYAL GDVHVQCDNC GLRVNLDFIK HIS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1r79A
Description: Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.71288992341677 bayes_pls_golite062009
protein binding 1.21002143294224 bayes_pls_golite062009
transcription regulator activity 1.03969156339274 bayes_pls_golite062009
nucleic acid binding 0.481861684281161 bayes_pls_golite062009
GTPase regulator activity 0.429290690332957 bayes_pls_golite062009
DNA binding 0.416562049130511 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.412309307675328 bayes_pls_golite062009
enzyme regulator activity 0.128532288148736 bayes_pls_golite062009

Predicted Domain #7
Region A:
Residues: [824-973]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCVPACFNS QQILVTFLKF FIKILGSYRN YLRKPHMSRE NFGISKGSGG LIGSFDFNKF  60
   61 TRQASKVHGS WISSLCSSQA FAEFIGDRCE LDLNDPRVAL FDQLLLCERN HGKPRLFGKA 120
  121 TPFLRDKSLE IQRIEVAPIP ASLKNDNALH 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.481486
Match: PF03455.10
Description: No description for PF03455.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle