Protein: | SPCC1906.02c |
Organism: | Schizosaccharomyces pombe |
Length: | 581 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1906.02c.
Description | E-value | Query Range |
Subject Range |
|
395.0 | [0..183] | [581..233] |
|
388.0 | [0..182] | [581..231] |
|
298.0 | [0..225] | [548..282] |
|
284.0 | [0..264] | [546..251] |
|
274.0 | [0..253] | [551..317] |
|
247.0 | [0..248] | [549..326] |
|
246.0 | [0..267] | [534..338] |
|
234.0 | [0..257] | [543..311] |
|
231.0 | [0..169] | [581..223] |
|
223.0 | [0..161] | [581..210] |
Region A: Residues: [1-169] |
1 11 21 31 41 51 | | | | | | 1 MSENVISSSK NVVSKLLYVK DEYWPSVAPA ATELISKLIN AFWCQTLNGQ LVEEDEGERN 60 61 CIFLFDRCLK TEGCLKKIGP VTVMQFLACF LLSSQNHAYA WSVCRQIPSD DMAFKFTKCF 120 121 QNSQQFRDAN FCKLVLVWTV CQCVSSTVYY PAILDLLPVL SDLVKEMEK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [170-265] |
1 11 21 31 41 51 | | | | | | 1 DPASLQAKEN EFWLKKLIQT SLHHSSDNSL VFYLEMLLDS LDLRNCIYVV FEDEALFRRL 60 61 KDIGNPEIRM MLDSGLRDWR KQRSGRSSSH VASKGI |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.732 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.638 | a.60.1 | SAM/Pointed domain |
View | Download | 0.618 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.583 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.570 | a.182.1 | GatB/YqeY domain |
View | Download | 0.560 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.473 | d.39.1 | Dynein light chain 8 (DLC8) |
Region A: Residues: [266-441] |
1 11 21 31 41 51 | | | | | | 1 NKVVNINPGD VKSLIELFPQ LSVEEAVEHL SASLGNIDAA CESVITSSLP EELDSSTHSP 60 61 IYTKPNVDSM HKQPKKAIAP LSLSSSVTAV ISNRTSDKKT RSTVAEEDDI THLNISPDRL 120 121 YLNKKPEDLN FWKKSVPETD KSRVLNLLAM AEDDEYDDTY DDLDTTGPVD SGVGDD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [442-581] |
1 11 21 31 41 51 | | | | | | 1 DPEASSKDAH DFQKFINQTL YDFYQQNPEV FDQKARKSKE RADLLAKLDN SLTHEQIEGW 60 61 RRMFTTDSKF AEAVKKEVTF GSGNTNIGSL RQTKFKQSNY TPPELNDGSR QHRPSRPSKN 120 121 PSLKKKKYVR TKPKKASNEK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.716 | a.118.9 | ENTH/VHS domain |
View | Download | 0.406 | a.118.9 | ENTH/VHS domain |
View | Download | 0.331 | a.118.9 | ENTH/VHS domain |
View | Download | 0.276 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
View | Download | 0.273 | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.267 | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.245 | a.118.1 | ARM repeat |