YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC18H10.20c
Organism:	Schizosaccharomyces pombe
Length:	361 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC18H10.20c.

Description	E-value	Query Range	Subject Range
gi\|49083900, gi\|... - gi\|67515549\|ref\|XP_657660.1\| hypothetical protein AN0056.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	330.0	[0..9]	[361..87]
gi\|114195277, gi... - gi\|115387375\|ref\|XP_001211193.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	320.0	[0..9]	[361..88]
gi\|83772836 - gi\|83772836\|dbj\|BAE62964.1\| unnamed protein product [Aspergillus oryzae] gi\|220692932, gi... - gi\|238499889\|ref\|XP_002381179.1\| arrestin (or S-antigen), N-terminal domain protein [Aspergillus fla... gi\|169779265 - gi\|169779265\|ref\|XP_001824097.1\| hypothetical protein [Aspergillus oryzae RIB40]	317.0	[0..8]	[361..81]
gi\|159126874 - gi\|159126874\|gb\|EDP51990.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|66851035, gi\|... - gi\|70997299\|ref\|XP_753399.1\| arrestin (or S-antigen), N-terminal domain protein [Aspergillus fumigat...	317.0	[0..9]	[361..90]
gi\|42547721, gi\|... - gi\|46111215\|ref\|XP_382665.1\| hypothetical protein FG02489.1 [Gibberella zeae PH-1], gi\|42547721\|gb\|E...	315.0	[0..4]	[360..58]
gi\|85090631 - gi\|85090631\|ref\|XP_958509.1\| hypothetical protein NCU09514 [Neurospora crassa OR74A] gi\|32418790, gi\|... - gi\|32418790\|ref\|XP_329873.1\| hypothetical protein [Neurospora crassa], gi\|28919878\|gb\|EAA29273.1\| co...	307.0	[0..4]	[361..117]
YDA5_SCHPO - Uncharacterized protein C1F12.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.... SPAC1F12.05 - conserved fungal protein	305.0	[0..7]	[360..8]
gi\|39940420, gi\|... - gi\|39940420\|ref\|XP_359747.1\| hypothetical protein MGG_05030 [Magnaporthe grisea 70-15], gb\|EAA52338....	300.0	[0..12]	[360..93]
gi\|88181410, gi\|... - gi\|88181410\|gb\|EAQ88878.1\| hypothetical protein CHGG_05497 [Chaetomium globosum CBS 148.51], gi\|1161...	297.0	[0..4]	[361..25]

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Predicted Domain #1

Region A:
Residues: [1-361]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKLALPRS TTPKDPARCT LDIRMESPPL VFLGSPETSS GALASGILKL TILHQPFIKV  60
   61 HTLKLQLIKR ITVLHPAISH CSACAGSKEV LQTWDLAANT TYRPGTQHWP FSWLFPGSLP 120
  121 ASVSNRYIKL EYYLEATLCY GTPEGGISPS KPEVLKFPLQ LKRAAIPSPD TIHKRIFPPT 180
  181 NLVANITLPS TLHPHGAALM EVTMTGFAQN DGNDWKINRV TWRLEEHMQF SCQPCERHRD 240
  241 LVKPRPIEEK RILSTQDLQS GWKFIDNQMF LSTQINTSSL REPSCDVEIP APFSLKVSHH 300
  301 LIFETIVNRK KNVAGNNMGN ARILRVSVVQ PLTTPAGLGI SWDEECPPVF ESVGPAPPAY 360
  361 T

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	6.69897
Match:	2fauA
Description:	No description for 2fauA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits