| Protein: | hrr1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1015 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hrr1.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..30] | [965..429] |
|
|
398.0 | [0..30] | [965..237] |
|
|
397.0 | [0..30] | [993..230] |
|
|
394.0 | [0..30] | [965..240] |
|
|
387.0 | [0..30] | [965..334] |
|
|
386.0 | [0..30] | [965..223] |
|
|
325.0 | [0..27] | [995..318] |
|
|
319.0 | [0..101] | [984..15] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MEQVQDEIWK LSTLDAWEMV NKNTEVVFDE IPEPETLSEM KRHPLYSNIF NADNNTTSFT 60
61 EQIETSETSK TQDSEGNKVD KNLKENKSIR RKRSIDNDYE LSNVKRNDIT SGKNREFENE 120
121 HHPASDTSSW RELPSIPTLE ELTSKSVELP SNNIYGGYK
|
| Detection Method: |  |
| Confidence: | 9.154902 |
| Match: | 2iykA |
| Description: | No description for 2iykA was found. |
|
Region A: Residues: [160-353] |
1 11 21 31 41 51
| | | | | |
1 SFEDYLSIHY RLLREDAVSP LRESVLRYKV NPNYITGSSL AVYDHVRIDG YTISSSVIAA 60
61 KLSFSVRAKK KIKWATSRRL ISGSLVLLSN DDFQTFRIGT VCARPLSGLN KHPHEIDVKF 120
121 EDISISLDPR EEYVMIEATS GYWEAYKHVL RSLQRLSAST FPMKDYLVHC KSNQETAKHI 180
181 QNNPRIRINS ILKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [354-882] |
1 11 21 31 41 51
| | | | | |
1 NSQKIVNALE PFGPGEYILD SSQLKAYQSM LTKRLSIIQG PPGTGKSFVT LKAIETLLEN 60
61 THSHVLPILV ACQTNHAVDQ ILIRLLHQGA SVMRLGSRTK DPEIAAVTIF QKAKHTKHSF 120
121 KAAYNEIRHK KQRLIKQITN IMHNFNLEFV TLSYLHSKGI ITTSQLESLR NNTEWISSVA 180
181 ENGEKTEEEL ISIWLGDAKV ELITPSEITD GFEEELQIDP EKLEEIQKEA EDSGALMEEE 240
241 LRGKFINLRC KYLFSKLTTL HEKEIDTLLT IPNIWDIPEY SRGIIYCRWL ESAYAAAEKE 300
301 LNRLYRFYLK VDRERIGFSN KRAAILLRGA NVIGMTTTGL NKYRDILERI NPKICFIEEA 360
361 ADVLEGPIIP AVFPSLEQLV LIGDHKQLRP GCSTYALRQD PFNLSISMFE RLVENDMEYT 420
421 RLTMQRRMHP QIRRLVSSVY EDLSDYEITK YWPSIPGMGE IRRFFLTHSR IEDNDGFASK 480
481 INLFEAQMLV QFAVYLINNG VEPQKITCLT FYAAQKDLIE RLLSESLNR
|
| Detection Method: | |
| Confidence: | 54.0 |
| Match: | 2pjrA |
| Description: | DEXX box DNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [883-1015] |
1 11 21 31 41 51
| | | | | |
1 EKHFIKVATV DGYQGEENDV VLLSLVRNND RTEVGFLSSP HRVCVSLSRA RRGLFIFGNA 60
61 QLVAESNPLW WDAINTLMND ETIQGLGDHL PLFTKDGTIY VNGKKSKQFQ FNFLTHSVDP 120
121 VELLDVNMRL TRK
|
| Detection Method: | |
| Confidence: | 61.09691 |
| Match: | 2gjkA |
| Description: | No description for 2gjkA was found. |
