| Protein: | SPBC13A2.02 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 803 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC13A2.02.
| Description | E-value | Query Range |
Subject Range |
|
|
294.0 | [0..8] | [780..22] |
|
|
260.0 | [0..233] | [802..1952] |
|
|
258.0 | [0..14] | [283..42] |
|
|
240.0 | [0..66] | [772..110] |
|
|
238.0 | [0..68] | [800..111] |
|
|
237.0 | [0..71] | [796..111] |
|
Region A: Residues: [1-393] |
1 11 21 31 41 51
| | | | | |
1 MASTIMSQEV SWTDILEKHP ALRWIKPIPE DWEIFPKHLC AFESFLYVAV GQEVRSLDCR 60
61 LLKHKNEASH KNFYKKLFNP ELDFMIEQIC LSKNGRFLAV VGKSKIVILG LRSKLSEQNP 120
121 LAESVSNFGE SVNNFSNSEH QENGTNSLKL SEVTICSVAV INPSSQIVSV RFHPLGKSGR 180
181 SLVVLTETSL LLYEAGNGVL MPDYEIPLKL THQASNSFDA DVDLHIPTAF CFSNVSQGWG 240
241 VFTIYILTRG GDVFSVCPVM PANAMIPQDV LKQIRLILTK KEDDADAENH RRNVHWITKL 300
301 LGEAALANDL STSFVISEGS SELFDSSDYV SVRRPDDFSF IPSMQGPFLL QPAVADDELI 360
361 EDYCDIYSFG MNPIDVLAIG GSEGRLDLLL LVS
|
| Detection Method: |  |
| Confidence: | 3.0 |
| Match: | 1erjA |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.93365005054985 | bayes_pls_golite062009 |
| protein binding | 1.54344559376183 | bayes_pls_golite062009 |
| transporter activity | 1.23232041140488 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.750051725890322 | bayes_pls_golite062009 |
| RNA binding | 0.430594402629414 | bayes_pls_golite062009 |
| protein transporter activity | 0.287037949110584 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0245411309982146 | bayes_pls_golite062009 |
|
Region A: Residues: [394-472] |
1 11 21 31 41 51
| | | | | |
1 EVSGRWSKLN DHGLASMKLI VSQVHSLYLS NNNPYMVLQP DIQSPYSLIA YHANGLHVVD 60
61 IESWARDLNL NFENSEFLN
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [473-803] |
1 11 21 31 41 51
| | | | | |
1 NEEENDEDEL SNVLVSIPSR TSVLERLDTN PLNESTDAVV GCAQLYYPSL GKILISLTRN 60
61 WQTTVFDDSD LATMGVNKES LSNEMDYSKS LGTSSLEQVD DLDEKLTYTP LYVSLLEKTP 120
121 FTDPSIPSLV ERTIVPAELQ NEITVSSASL RFLGKVVARY RETLNLLDHG CSELHHRLKL 180
181 QREEYERQQN HIYKLSDRIS NFREKAWSTE HLEHLTSDMS MCEKRIDQVL QRVMDLRVPD 240
241 LSDKEKQFIK EIGNYKEKVT GERGIEKRVE TLKTLLQRTK PRDAQTTLVA SSSDMRLAAI 300
301 EQLQKLLAQQ SLSIKELKTK TVSFQRLLQT S
|
| Detection Method: | |
| Confidence: | 23.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
