| Protein: | SPBC13E7.03c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 713 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC13E7.03c.
| Description | E-value | Query Range |
Subject Range |
|
|
238.0 | [0..4] | [600..1017] |
|
|
204.0 | [0..3] | [595..613] |
|
|
201.0 | [0..19] | [583..136] |
|
|
198.0 | [0..11] | [602..771] |
|
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196.0 | [0..11] | [602..1377] |
|
|
186.0 | [0..15] | [620..302] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MEVVEGRRKT CLDVVDSPSS RQKQTIAVSL VDGKNYPTRF LNSRTIDKLK QELNTSNLST 60
61 GEMSTNETLK NAQEVAGKLL SEENEDSISE HFDEYLGADK PGISFLTRLK TLESWFQSLS 120
121 LQDRLTTLRT LLHHLPSQEI STLLSSSLTS SPSNSGLSLD KSLPSSPKGD SPSLSSSLPS 180
181 LTTKSNLSGN LNMVTPASTQ GPAFSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-349] |
1 11 21 31 41 51
| | | | | |
1 KHGFSNALST ASPIPVRTSS VSSTYLTQDR EASSKNCLSK ALAFSSIEPP ASSASTSPRN 60
61 TPTPSNNGTS INANVTSSLT SNSTGKTSKT TDLLIAASKK SLPSNSTPSK PNTSFFETPH 120
121 NNIWDSRDRG AFSAPPAPFF PLG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [350-543] |
1 11 21 31 41 51
| | | | | |
1 FSPHLNDESS RSRWSNISYS PPPPPPPPEL LNHSPKSRPL GDKPYLFYRN NQIGPRTRTE 60
61 GRSSITEGKP FLSSSLRFEH VPSANDLNSV VNARVEKSTG QPSTPLNRQH YFNELPHSTT 120
121 PVTLPSLIHG SEIDRRRSGF CLNNFNSTPP FQPYHYEIGS GLPQQMHATN TILTNPIDPN 180
181 SNISTPVGMH LCTL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [544-713] |
1 11 21 31 41 51
| | | | | |
1 PYTYQPFSSV EKIETPPNNS KNQTYRRSSR GSNKTRKSIS HSKNTDKHVG NELPQDIPSW 60
61 LRSLRLHKYT NNLKDTDWDA LVSLSDLDLQ NRGIMALGAR RKLLKSFQEV APLVSSKKMN 120
121 ENLKAAKNQS SESLTSFKGH TDSEDLPSGS MSNEISSNST KQDVSSSSMD
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 2b6gA |
| Description: | RNA recognition by the Vts1 SAM domain |
Matching Structure (courtesy of the PDB): |
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