| Protein: | SPCC794.11c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 476 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC794.11c.
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..11] | [466..2] |
|
|
244.0 | [0..14] | [252..1] |
|
|
236.0 | [0..25] | [466..35] |
|
|
226.0 | [0..14] | [222..1] |
|
|
219.0 | [0..2] | [418..4] |
|
|
209.0 | [0..8] | [263..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MESIQSTMKN INLYDIKAAV RKAQNVVMNY TSMEARVREA TNNEPWGAST SLMMEIAQGT 60
61 HNYSQLNEIL PMIYRRFTEK TAEEWRQIYK ALQLLEFLVK NGSERVVDDA RAHQATIKML 120
121 RNFHYIDHRQ KDQGLNVRTR AKELVELLND SERIRKERKR ARQNR
|
| Detection Method: |  |
| Confidence: | 55.522879 |
| Match: | 1h0aA |
| Description: | Epsin 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 7.05477548709703 | bayes_pls_golite062009 |
| binding | 2.34501465852339 | bayes_pls_golite062009 |
| protein binding | 1.97365365208963 | bayes_pls_golite062009 |
| phospholipid binding | 1.38798066582556 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.26458267960741 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 1.20269437433936 | bayes_pls_golite062009 |
| ADP-ribosylation factor binding | 0.95608914040147 | bayes_pls_golite062009 |
| lipid binding | 0.176990783274449 | bayes_pls_golite062009 |
| GTPase binding | 0.0887270623721197 | bayes_pls_golite062009 |
| small GTPase binding | 0.0268749201897704 | bayes_pls_golite062009 |
|
Region A: Residues: [166-346] |
1 11 21 31 41 51
| | | | | |
1 GKFIGVGSDG DSRISTSSKS RFPSFGSSRG SYRTRVYGDG GGFTDYGNGY HDSSSMSDSR 60
61 DASDNDVEEY NEDGDGGSSD AATANSTRGS RRTTTKQSDK APEQPKQESA MIDLLGLDNE 120
121 PSPAQPQTNT SAPLAFEDDG FGDFQSSAAA PASSTLNNAS LFMGSQTAST AAKNDDDAFD 180
181 D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-476] |
1 11 21 31 41 51
| | | | | |
1 FQSAPSAKPA SNTAAFSSIS FGGFNSLNQL PTSSSAFTPQ PTTFNTGYTS AFGMSSGLSN 60
61 TSSQAGLGLT SQQPTAAKSS GSNGDAFGSL WSSAVNKVHQ ENSTRERVVS SSSEPVSKTQ 120
121 NFLDNDNLLL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
