| Protein: | SPBC428.06c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC428.06c.
| Description | E-value | Query Range |
Subject Range |
|
|
238.0 | [0..4] | [163..173] |
|
|
226.0 | [0..6] | [163..11] |
|
|
210.0 | [0..5] | [163..9] |
|
|
188.0 | [0..5] | [163..9] |
|
|
179.0 | [0..5] | [163..9] |
|
|
173.0 | [0..27] | [169..47] |
|
|
151.0 | [0..6] | [159..8] |
|
|
151.0 | [0..33] | [160..85] |
|
|
146.0 | [0..66] | [162..5] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MKQFEEQIER FKQALFEDSD ASDSDSSIGE ALTNRGLKRK KGSKNVYYGC VGNSSGSSID 60
61 IDVCYYNIGN TKRGVVSHFR RRIDPEWLDH DNPYNDINIA EIMSPLTKPQ DLLTHPAISS 120
121 IFEQNYLSIL ASSALEIISA EHKYTAHLEQ LMVALLGDDP SLP
|
| Detection Method: |  |
| Confidence: | 65.065502 |
| Match: | PF08595.2 |
| Description: | No description for PF08595.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [164-242] |
1 11 21 31 41 51
| | | | | |
1 GPPHEVFGIS PEQCRELTIT VQEALEKSKE FIRCWTNVRM DLLRAIRFKN KVIAYCQGED 60
61 YNGNTQVLSK NESDGKPNS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.956 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.802 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.586 | a.60.8 | HRDC-like |
| View | Download | 0.537 | d.17.1 | Cystatin/monellin |
| View | Download | 0.521 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.521 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.457 | a.46.1 | Methionine synthase domain |
| View | Download | 0.439 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.433 | d.131.1 | DNA clamp |
