| Protein: | SPBC29A10.07 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC29A10.07.
| Description | E-value | Query Range |
Subject Range |
|
|
1677.0 | [0..6] | [1249..93] |
|
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1651.0 | [0..13] | [1242..62] |
|
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1645.0 | [0..11] | [1243..61] |
|
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1609.0 | [0..2] | [1244..73] |
|
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1573.0 | [0..13] | [1243..97] |
|
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1457.0 | [0..16] | [1243..74] |
|
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1435.0 | [0..14] | [1249..57] |
|
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1433.0 | [0..9] | [1249..51] |
|
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1397.0 | [0..8] | [1248..22] |
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1331.0 | [0..4] | [1248..44] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MVTRVASSER PRPLVPESIV DAPTQRLYAI GVFVALQAYK IYDLLKLETS SISDVPKSGF 60
61 LVKWIIIDAI YLRLLPKFRI PWLSFQPAAT LLQIAIFAAI NLLLSSLSSL KWISIGSILL 120
121 PYFKKKELSI SEHKINPNNV IHNSSRILGQ YTLQVLPEGT AKINPLHENY CLNSLRKDQY 180
181 VDLAIQFNST IPKYIQYSHV DLETKEETLV EVSGRSLRKL LSSSSKNP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [229-325] |
1 11 21 31 41 51
| | | | | |
1 KEPRLQTIYL KTNKRGLYTL KHVVDKSKLD VRIFRSEAVV VSCPTATFAS RQSGGRLRER 60
61 CVGDTDNAEL KVTGVAPLQV TYRNWDGKHF NTHIIDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [326-434] |
1 11 21 31 41 51
| | | | | |
1 TIPDDFHPPA VVLSSNPKDI VFYKGIDIQW ARSSEIFVPI NTLLKAPGQW IYAVTQVTDA 60
61 LGNSQQFPSN DQFLLRFAHG YTEADGESHS LPENVYSVFV HQRPDIQFR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [435-1145] |
1 11 21 31 41 51
| | | | | |
1 GCSIESPANL FPNKETSLSL YSSFSEYNSL EVGVDRYELG LDPQNITVPP LSHKTYQISP 60
61 RSSANINVKK PGIYVLSSVS SQYCSGEVLE PNTCLVVTPP EAKVSVSFEE ISDQCAGSIG 120
121 ARADLELEGT PPFTIAYRMT KDNEASRIQY VTTDRTRYQL NFTPKKAGKY RYIILGIQDA 180
181 NYGYRELSGS SFYKDQTVFP LADASFEERR NGDLSTVVKT SCIGDTMSLP VLLTGSAPWT 240
241 LEYEIFRNNK REESHVVESK DPRYILEVPM LVHGSQYTIT LVSVKDSNGC KRSLNTADTV 300
301 IKVRRQRPTA TFYSSDNTYT LKSVEGALMK IPLRLAGEKP WYVEYSHTSG LNKVSHHKEV 360
361 LNDPNSYLTV RKSGTYTLLS VSDSSCPGTI QNVEQKYQVE WLPRPFLSIP SLESSVKGKT 420
421 RYYEQNAVCA GDSSAFEVQL SGSGPFLLKH DKILVDEKSK TYPKQKSELS TVQNTVLVKA 480
481 DTAVPGVYHY EFTKLSDSLY SDSDAVTIVN NQSYQAVVLQ RVNSLPKASF MNVEKLYTFC 540
541 INTDVTQSNA QLIAIQLQGA SPFSLVIGIK NELTGSVSKY TLNDIHESVY KFAFPQEQLT 600
601 LGKHVVRLLQ VRDANGCAAS ITKTQPAAKV SVVEMASLAP LGSRQYYCVG DRLSFALQGL 660
661 PPFDVEYEFN GVTQHATSDS HILTRLIELP GVVAMKSISD HGSHCKSYIN P
|
| Detection Method: | |
| Confidence: | 5.84 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
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|
Region A: Residues: [1146-1250] |
1 11 21 31 41 51
| | | | | |
1 PIEQIVHDIP TVRISNGKDV IENIHEGDQA EISFHFTGTP PFSFSYARRA LGKKRPGKVL 60
61 ETHTVTGINE YEYKVLSSVE GVYTVLSVQD KYCRYPQDST SSSNI
|
| Detection Method: | |
| Confidence: | 3.98 |
| Match: | 1z7zI |
| Description: | Cryo-em structure of human coxsackievirus A21 complexed with five domain icam-1kilifi |
Matching Structure (courtesy of the PDB): |
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