| Protein: | swi1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 971 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for swi1.
| Description | E-value | Query Range |
Subject Range |
|
|
1169.0 | [0..1] | [971..1] |
|
|
973.0 | [0..2] | [949..14] |
|
|
968.0 | [0..2] | [949..14] |
|
|
947.0 | [0..2] | [941..14] |
|
|
865.0 | [0..2] | [951..16] |
|
|
862.0 | [0..2] | [951..16] |
|
|
851.0 | [0..2] | [942..14] |
|
|
824.0 | [0..3] | [935..39] |
|
|
806.0 | [0..3] | [935..20] |
|
|
800.0 | [0..2] | [971..18] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MELDEVIQGI VSAIGGFDYS DDEKVYVLGD EALACLKDLK RYLQVVDEKY KVWQIRSLLS 60
61 SLQLVTNDIC PILSDWDKDI TNYRNWRIAL ACVELLVPLT WPLETEHETF RENVDVLYNL 120
121 RQAQSNYKNS ILSYKKGSVL SAILAVLLKP LSTPAESRTL RDKGIIRIVL LLFRNILQID 180
181 ELKTKNETII SFAKAHILDL IVTLVSNLDE FEHFDVYI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [219-397] |
1 11 21 31 41 51
| | | | | |
1 LEIVYNLIRG CKPSALFSDA SLTNSQTELN SLLLKESTQN RYLKRNAHTR HNRFGTMLSV 60
61 QTEDRRFTIA SQNIKTDGLD ELDSHKRFRK RGTRRKHFDD INKSFFINTE AGTALRNFAV 120
121 EFLEAGFNPL FQSLLKDLER EDPRVLPIHK MQLLYVQSFF LEFMRFSSKP KKTEEIYSN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [398-554] |
1 11 21 31 41 51
| | | | | |
1 DYSFGLAASV FDQRALIMHN RLMVESFEMK QWSTFQASML SMTQLLFTLR SMTLCSSEIY 60
61 QRIADNLLSN IFYQEEILLL VYSALKHFKT QSFGYLDAIT ELTIVLLKEL EKFSSAKQYL 120
121 YVKKRRRNQK SVDSNVLESD EDEESSLINA NAAVEDR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [555-664] |
1 11 21 31 41 51
| | | | | |
1 LFDFGRYESR YCDNGCIDSF VLFLQCYQDL DSKQIHRAIS FFYRIFVKQK CHVYLYRLDF 60
61 LRVLDKMFND HVYFSTTNSA RQDFEQFFVY YMRKLSDALK DVPALFIELP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.941 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.924 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.893 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.862 | N/A | N/A | a.29.8 | Description not found. |
| View | Download | 0.851 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.849 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.848 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.824 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.810 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.808 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.564 | N/A | N/A | a.159.4 | Description not found. |
| View | Download | 0.484 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.426 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.387 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.383 | N/A | N/A | a.159.4 | Description not found. |
|
Region A: Residues: [665-749] |
1 11 21 31 41 51
| | | | | |
1 FPKLTDTFYY LEYGKSPLFS IHGSRKGPLY ETVPGLSHLE KVAAVVACLI NENKSDLLDE 60
61 LKVQLNCLIS ERKLITLADE NKYIN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.755 | a.8.11 | Description not found. |
| View | Download | 0.751 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.745 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.737 | a.118.1 | ARM repeat |
| View | Download | 0.701 | a.8.11 | Description not found. |
| View | Download | 0.664 | a.8.11 | Description not found. |
| View | Download | 0.643 | a.3.1 | Cytochrome c |
| View | Download | 0.602 | a.7.8 | GAT domain |
| View | Download | 0.561 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.538 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.360 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.311 | a.7.8 | GAT domain |
| View | Download | 0.307 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.303 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [750-971] |
1 11 21 31 41 51
| | | | | |
1 EGGNDGERMG KNLKGDTDSF NTALLKDGKF RLLLELCGFE ESDNNIDVQA LWKLPNSVII 60
61 DELVEHAMLL RRFTDDPPTF EGTKPEDLLV RKQRGNVRLP SSSEGETSDE EIEFEADDPI 120
121 TFANRREALN KITDRKRKKM KTNETIIDHT TRKKKENHLR SAKYIVDSDD DSETDIAFFQ 180
181 SEAALREKNA QKASALFKRI DDLEMEGKLQ EIEQLSENSS SD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
