YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC1450.15
Organism:	Schizosaccharomyces pombe
Length:	503 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1450.15.

Description	E-value	Query Range	Subject Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1 FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...	271.0	[0..18]	[266..1]
gi\|18310052, gi\|... - gi\|18310052\|ref\|NP_561986.1\| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens st...	268.0	[0..20]	[268..2]
gi\|168210762, gi... - gi\|170711222\|gb\|EDT23404.1\| 3-oxoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens B st... gi\|110675446, gi... - gi\|110800799\|ref\|YP_695772.1\| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens A... gi\|170660709, gi... - gi\|170660709\|gb\|EDT13392.1\| 3-oxoacyl- reductase [Clostridium perfringens E str. JGS1987], gi\|168207...	267.0	[0..20]	[268..2]
gi\|146296617, gi... - gi\|82501013\|ref\|ZP_00886394.1\| 3-oxoacyl-(acyl-carrier-protein) reductase [Caldicellulosiruptor sacc...	266.0	[0..20]	[268..4]
gi\|89098688, gi\|... - gi\|89098688\|ref\|ZP_01171570.1\| beta-ketoacyl-acyl carrier protein reductase [Bacillus sp. NRRL B-149...	265.0	[0..18]	[268..1]
gi\|110803752, gi... - gi\|110803752\|ref\|YP_698460.1\| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens S...	265.0	[0..20]	[268..2]
gi\|219540094, gi... - gi\|68206640\|ref\|ZP_00558823.1\| Glucose/ribitol dehydrogenase [Desulfitobacterium hafniense DCB-2], g...	263.0	[0..18]	[264..1]
gi\|89334854, gi\|... - gi\|89895406\|ref\|YP_518893.1\| hypothetical protein DSY2660 [Desulfitobacterium hafniense Y51], gi\|893...	262.0	[0..18]	[264..1]
gi\|25283158 - pir\|\|C83961 3-oxoacyl-(acyl-carrier protein) reductase fabG [imported] - Bacillus halodurans (strain... gi\|10175111, gi\|... - gi\|15615054\|ref\|NP_243357.1\| 3-oxoacyl-(acyl-carrier protein) reductase [Bacillus halodurans C-125],...	262.0	[0..20]	[268..2]
gi\|158320488, gi... - gi\|158320488\|ref\|YP_001512995.1\| 3-oxoacyl-(acyl-carrier-protein) reductase [Alkaliphilus oremlandii...	261.0	[0..18]	[268..1]

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Predicted Domain #1

Region A:
Residues: [1-272]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCTFIKNTL QSNFGYFLTS CHSHILVTGG SQGLGKAIAK ELVLRGANVT IVARTVTKLQ  60
   61 EAVAELSDSK IHEDQQVSFE SVDLTSYESV HSMIERLPFC PDHVVHCAGS CIPGFFTELD 120
  121 PSVFEKQMRQ NYLASVYVCH AAIRRMKEIS PSYSRRILLV GSLLSSLPII GYSAYSPVKA 180
  181 AVRNLADSLR QECILYDIEV SVYLPSTILS PGYEQENTLK PELVLQMEGM DSVQTCEEAA 240
  241 SHCMTGLDRG DFLIANESTG HLMKNHCRNS SP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	67.39794
Match:	2p68A
Description:	No description for 2p68A was found.

Predicted Domain #2

Region A:
Residues: [273-503]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDNPILEYLF ALVSLLAWPF YRRKLDSLVY QYALEKGYRQ PSSSRNSWIF TLLLTFTQLT  60
   61 IFYLSLNCLI ENPYRMLRNT FPIWFIMQTL QIYIQSPRPP LTPKRLLAGA ASMLIGSLLI 120
  121 SFILVAFGAP LLHDFHLTYF CALTLSVFTV YPLASTLAFN TEQWQRFLTL KSFNVIGSMQ 180
  181 LRSWGPIIGA WFGAFPIPLD WDRPWQAWPI TIVIGAFLGY AFAAIVGEIL Q

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	18.431798
Match:	PF06699.2
Description:	No description for PF06699.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits