| Protein: | SPBC20F10.07 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 764 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC20F10.07.
| Description | E-value | Query Range |
Subject Range |
|
|
463.0 | [0..109] | [684..27] |
|
|
461.0 | [0..103] | [684..150] |
|
|
459.0 | [0..88] | [679..237] |
|
|
457.0 | [0..111] | [679..2] |
|
|
451.0 | [0..109] | [684..12] |
|
|
450.0 | [0..100] | [684..29] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MKEENGFAGF LNTAVNRLSG VLNDTAPTKS QSLKNGVNNE GNRGFSLFRN PRFMSDEKLS 60
61 SEASSHSTLG QQQARDGRQS PSKEAPFGEG ELKLENFENQ ENEADEAENE ETSYSEQNHT 120
121 ENTEEIAEES RPLERTHSGS NHHEASSTGH LNLPPLENTL SQGSAITAPS RKVSITSSNG 180
181 VSARL
|
| Detection Method: |  |
| Confidence: | 1.45 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-262] |
1 11 21 31 41 51
| | | | | |
1 SGYAFANSKR NRDFHRIFKV LPPEDHLIDD YGCALQRDIF LHGRMYLSES HICFNSSIFG 60
61 WVTNIVIPVT EIVSVEK
|
| Detection Method: | |
| Confidence: | 30.537602 |
| Match: | PF02893.11 |
| Description: | No description for PF02893.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-382] |
1 11 21 31 41 51
| | | | | |
1 KSTAVVFPNA IQITTLHARY IFASFISRDT TYQLIIAIWK NTHPFLTTLA NGHGVMDASG 60
61 NHHSGSSNQS INADSSAGSE GVDEGTSTEA NDESSEDDDE DNNTDEANED AQSNVSDESP 120
121
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [383-600] |
1 11 21 31 41 51
| | | | | |
1 KGEGSSHSDN VVLSDGNSVK KMNEDGADTS LLSVSEVTSH PPTEWTGSPL AHVLCSDVVN 60
61 LSVSTVFNLL CGSDTTWIIN FFKSEKLTEI KIGKWEKIDD KWNRKVQYIK PVAPPYRQTS 120
121 CYITDTIQHL DINNYIEILS TTSTPDVPSG TSFVVKTLYA LSWAHSSKTK LNISYSVEWS 180
181 KSSWLKGPIE KGAQEGQASY VKDLLTAFEN YKVSPKGR
|
| Detection Method: | |
| Confidence: | 0.986 |
| Match: | 1ifvA |
| Description: | Plant pathogenesis-related protein PR10 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0122410645074446 | bayes_pls_golite062009 |
|
Region A: Residues: [601-764] |
1 11 21 31 41 51
| | | | | |
1 RKKITKHTKK KNKHASETSV APEKVDNSSI EQSSSFLTKL YTFPFTIITW LMHPTHLLLV 60
61 VMFSMLVLQW WYMQQILHAE LPSTSSRSDS SRDLDFDHIP MDDTAFKLWI TSRLDSVERD 120
121 RDFVYENSDP NLEHGKIKIA TDYMERRLKK LKERLRKLEA SGYI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
