| Protein: | SPAC23H4.15 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 783 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23H4.15.
| Description | E-value | Query Range |
Subject Range |
|
|
832.0 | [0..4] | [780..5] |
|
|
814.0 | [0..2] | [779..52] |
|
|
814.0 | [0..1] | [782..5] |
|
|
814.0 | [0..3] | [783..8] |
|
|
813.0 | [0..2] | [779..3] |
|
|
803.0 | [0..2] | [779..3] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MAHHHRSTFK AKKPFKSKHA SKSSLKEKYK NEVEPHRSGP KNIVHTSTKA DRRNTAKQIQ 60
61 LNKRTEVAMN NRIFGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.609 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.599 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.430 | a.2.3 | Chaperone J-domain |
| View | Download | 0.394 | a.2.3 | Chaperone J-domain |
| View | Download | 0.371 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.360 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.354 | a.64.1 | Saposin |
| View | Download | 0.347 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.313 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.303 | a.64.1 | Saposin |
|
Region A: Residues: [77-285] |
1 11 21 31 41 51
| | | | | |
1 KNGAPKVITI VPLCNNVDSW NVLTNLLRSI DPEASLPKFD KDSISYSTTI DRFKQNLLFL 60
61 LPKREFYSLI DACKVSDYVI FVLSAVQEVD EFGELIVRTT QGQGISSVLS MVHDLSEVDS 120
121 LKTRNEVKKS LQSFMNFFFS DQERVFAADV SQDALNVMRA LCTSHPRGIH WRDSRSYLLS 180
181 QEISYSNGNL LVRGIVRGKG LDPNRLIHI
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1kk0A |
| Description: | Initiation factor eIF2 gamma subunit, domain II; Initiation factor eIF2 gamma subunit; Initiation factor eIF2 gamma subunit, N-terminal (G) domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [286-340] |
1 11 21 31 41 51
| | | | | |
1 QGFGDFAINR IYEAPQGIQN SRGISMDEDT NLTGGLVELC SPTQEQDSLE SLGPI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.637 | a.4.1 | Homeodomain-like |
| View | Download | 0.594 | a.4.1 | Homeodomain-like |
| View | Download | 0.586 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.505 | a.4.1 | Homeodomain-like |
| View | Download | 0.463 | a.4.1 | Homeodomain-like |
| View | Download | 0.444 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.431 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.416 | a.4.1 | Homeodomain-like |
| View | Download | 0.391 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.282 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.242 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [341-516] |
1 11 21 31 41 51
| | | | | |
1 IDDMDTDMDS EVGKEASRGV RLDDFYYFDD EEEPVAVAKR VPKGTSTYQA TWIPDEDEES 60
61 DQYSDVEDTE VIIEDQDNQE ISNHVAEEKI DSDEEETIDD AKSEMFVDLS EEEEVRQYEE 120
121 YRKKQKELQE ELEFPDEVEL QPNELARERF KKYRGLRSLY TSQWDADEYD PNEPRE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [517-576] |
1 11 21 31 41 51
| | | | | |
1 WRQLFKFENY RNLKNKFLKQ PFIGEAKPGK AVYVELRNVP IEIFEYYNKP WNLLVLYSLL 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.530 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.520 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.496 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.460 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.415 | a.218.1 | Description not found. |
| View | Download | 0.415 | a.10.2 | Description not found. |
| View | Download | 0.410 | d.11.1 | Penicillin-binding protein 2x (pbp-2x), c-terminal domain |
| View | Download | 0.383 | a.4.1 | Homeodomain-like |
| View | Download | 0.373 | a.4.1 | Homeodomain-like |
| View | Download | 0.356 | d.68.3 | SirA-like |
| View | Download | 0.213 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [577-712] |
1 11 21 31 41 51
| | | | | |
1 QYENKLTVSQ FTAMQHSEYE EPIESKEELL LQIGPRRFMV RPLYSDPTAS GASNNLQKYH 60
61 RYLPPKQAVI ASVISPIVFG NVPIIMFKKS SDNSLRLAAT GSYVNCDTNS VIAKRAVLTG 120
121 HPFKVHKKLV TIRYMF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.378 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.338 | N/A | N/A | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.326 | N/A | N/A | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.314 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.269 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.245 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.242 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.227 | N/A | N/A | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.225 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.220 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.219 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.204 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
|
Region A: Residues: [713-783] |
1 11 21 31 41 51
| | | | | |
1 FNPEDVIWFK PIQLFTKQGR TGYIKEPLGT HGYFKATFNG KITVQDTVAM SLYKRMYPLP 60
61 CELFKVTDID S
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.686 | b.34.19 | Description not found. |
| View | Download | 0.643 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.640 | d.52.8 | Description not found. |
| View | Download | 0.637 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.627 | b.38.2 | YhbC-like, C-terminal domain |
| View | Download | 0.617 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.606 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.603 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.560 | d.10.1 | DNA-binding domain |
| View | Download | 0.558 | d.58.5 | GlnB-like |
| View | Download | 0.477 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.388 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.336 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.323 | d.50.1 | dsRNA-binding domain-like |
