| Protein: | sre1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 900 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sre1.
| Description | E-value | Query Range |
Subject Range |
|
|
609.0 | [0..118] | [778..4] |
|
|
608.0 | [0..197] | [788..2] |
|
|
524.0 | [0..8] | [770..17] |
|
|
515.0 | [0..167] | [860..72] |
|
|
494.0 | [0..124] | [777..14] |
|
|
479.0 | [0..117] | [783..14] |
|
|
432.0 | [0..45] | [770..56] |
|
|
402.0 | [0..121] | [769..87] |
|
|
392.0 | [0..1] | [890..47] |
|
|
233.0 | [0..132] | [532..41] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MQSSIPSVSV SVASPAMETP TKASPDSKSP NSVGAIPSSS PLASSTKAST STPFVENCSN 60
61 LLCDLASIVE DSPPTLTNTS LSPHSFSLSD MESSMSNWLN PFAFDNTMNS APPLFTSTNM 120
121 GSPNSLENST NPLLSNCGSP NSFQNETFTG PSLNEF
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [157-255] |
1 11 21 31 41 51
| | | | | |
1 DADDKIQRQM KILHSVDTID PSTVQNYPSA DMSNPEVKLK TEEIITPMDT TCKPEPSAKK 60
61 IKLSPSSEDS CSIPETLPFS APKSRGSLSP SETPDFVAG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [256-377] |
1 11 21 31 41 51
| | | | | |
1 PGGKPKKTAH NMIEKRYRTN LNDRICELRD AVPSLRAAAA LRCGNSLDDE DLGGLTPARK 60
61 LNKGTILAKA TEYIRHLEAK NKELQKTNKQ LSDRLAFYED PSMAPPSNDT RAVNSVNVVS 120
121 SS
|
| Detection Method: | |
| Confidence: | 21.154902 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [378-473] |
1 11 21 31 41 51
| | | | | |
1 DYSVHQSSRP NLTQRAFTSP TLNTMGRTAL NGMVGLGLFN YFGNDSSQSV YGLFALPPFL 60
61 MSPFTGTVLF NMLKIGVVLL GLFYLLHDNS LFKGFK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [474-678] |
1 11 21 31 41 51
| | | | | |
1 GEKKSKVSTR SSMSPSSILF RKTVFEKYCL LDHSTSTISL FFGLLIFTLK SAYGYLTHRL 60
61 SALYTSSENW VYSEQQLAEV RNMEKLLDAQ LMGGDAKVDR LRLLMVFASS FSLPPSSHTC 120
121 ALQAMYCQLI FSNTSVPSAI VSKCVAFFWN AAKKQHSKSS VHAELRELPE CTANLIENSH 180
181 ADDVFSPNMV ERLWVLAKCT RDSAQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [679-779] |
1 11 21 31 41 51
| | | | | |
1 MSDSIISSLS DVLVLSPLEV LASWYAADLL DALLMESLSR KVEISEIEEI ISLCPKNSSI 60
61 IRHALLAKLV LFPENTADSL NEVLAAYKNT LDLCSQDKRK Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.926 | a.77.1 | DEATH domain |
| View | Download | 0.924 | a.77.1 | DEATH domain |
| View | Download | 0.716 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.685 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.650 | a.118.8 | TPR-like |
| View | Download | 0.639 | a.118.8 | TPR-like |
| View | Download | 0.629 | a.64.1 | Saposin |
| View | Download | 0.619 | a.77.1 | DEATH domain |
| View | Download | 0.610 | a.77.1 | DEATH domain |
| View | Download | 0.593 | a.64.1 | Saposin |
| View | Download | 0.386 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.354 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.303 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.298 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.265 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
|
Region A: Residues: [780-900] |
1 11 21 31 41 51
| | | | | |
1 SSVLKINLSK LFTLHSCLSL ALQRLGYGDV SKRMYQEIFV PDSDADITPL SFIISWTALN 60
61 TFAPICTSPK ENDVVEKMAM YVRTAIGTLK IQDLKLSRKL INSCIDIGSR LQEDLGYVSS 120
121 A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.859 | a.24.3 | Cytochromes |
| View | Download | 0.802 | a.24.3 | Cytochromes |
| View | Download | 0.771 | a.24.3 | Cytochromes |
| View | Download | 0.715 | a.24.3 | Cytochromes |
| View | Download | 0.700 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.660 | a.24.18 | Description not found. |
| View | Download | 0.626 | a.24.3 | Cytochromes |
| View | Download | 0.280 | a.1.1 | Globin-like |
| View | Download | 0.263 | b.55.1 | PH domain-like |
| View | Download | 0.235 | a.24.23 | Description not found. |
| View | Download | 0.206 | a.25.1 | Ferritin-like |
