| Protein: | SPBC15C4.03 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC15C4.03.
| Description | E-value | Query Range |
Subject Range |
|
|
590.0 | [0..1] | [459..1] |
|
|
589.0 | [0..5] | [457..309] |
|
|
588.0 | [0..1] | [459..3] |
|
|
587.0 | [0..1] | [459..1] |
|
|
586.0 | [0..5] | [457..70] |
|
|
586.0 | [0..5] | [459..3] |
|
Region A: Residues: [1-459] |
1 11 21 31 41 51
| | | | | |
1 MDDPNSYDVI IVGTNLRNSI LSAALSWANQ RVLHIDENSF YGEIDGSLTL RDLEQINEKI 60
61 KKVDSSQILN DNGSHKSPLK RFEVQFLNKD LIPKNKGSVI QFHPQEIFAS SELVKLLSET 120
121 KIYKYLLLKP ARSFRLLTSN EEWIKVPESR ADIFNNKNLS LASKRIVMRF MKFVSNIADE 180
181 QNQNLVKEWE SKPFYKFLEE VFQLSGAIEE SIIYGLCQSL SKDIPTKDAL DTVLKYFHSF 240
241 GMYGDYSYLL AMYGTGSELC QGFCRSSAVM GGTFMLGQAI DKIDESKIVL KDGSTLSAKK 300
301 IVSSVDEGKL PHQQIQQRYL LVKGDCQQLF QEDGFFAALD ASLIHFSPFS ISENFGNSVQ 360
361 AKLYGSGSGD CPEGYCIWYL KTLNDSPCNE VFNLATKKLC SFSGCDDLEI IVQVDETLNQ 420
421 LRHIDYDDTL HSAKSLFYEI LGQNNTFLQR EGLFDEDDE
|
| Detection Method: |  |
| Confidence: | 169.0 |
| Match: | 1lv0A |
| Description: | Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small GTPase regulator activity | 1.82777033221452 | bayes_pls_golite062009 |
| binding | 1.71679209220564 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.69589677829425 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.67690582043816 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.00883251592654 | bayes_pls_golite062009 |
| transcription regulator activity | 0.602525263475244 | bayes_pls_golite062009 |
| nucleic acid binding | 0.435947245962802 | bayes_pls_golite062009 |
| DNA binding | 0.390557138920256 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.387378304822822 | bayes_pls_golite062009 |
| protein binding | 0.347133050347128 | bayes_pls_golite062009 |
