YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPAC9.08c
Organism: Schizosaccharomyces pombe
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC9.08c.

Description E-value Query
Range
Subject
Range
gi|62740082 - gi|62740082|gb|AAH94046.1| Gpsn2 protein [Mus musculus]
246.0 [0..27] [282..123]
gi|60551245 - gi|60551245|gb|AAH91002.1| Gpsn2 protein [Xenopus tropicalis]
243.0 [0..23] [282..103]
gi|256994, gi|21... - gi|256994|gb|AAB23534.1| SC2 [Rattus sp.], gi|2144098|pir||I56573 synaptic glycoprotein SC2 [importe...
TECR_RAT - Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus GN=Tecr PE=1 SV=1
242.0 [0..27] [282..69]
gi|109123711 - gi|109123711|ref|XP_001112313.1| PREDICTED: glycoprotein, synaptic 2 [Macaca mulatta]
241.0 [0..27] [282..84]
gi|157750406 - gi|157750406|ref|XP_001678916.1| Hypothetical protein CBG11196 [Caenorhabditis briggsae AF16]
gi|39590267, gi|... - gi|39590267|emb|CAE66005.1| Hypothetical protein CBG11196 [Caenorhabditis briggsae], gi|187030527|em...
240.0 [0..32] [282..71]
TECR_BOVIN - Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1
239.0 [0..27] [282..69]
gi|13111809 - gi|13111809|gb|AAH00174.2|AAH00174 Unknown (protein for IMAGE:2901253) [Homo sapiens]
238.0 [0..27] [282..65]
art-1 - status:Confirmed UniProt:Q9N5Y2 protein_id:AAF39753.1
237.0 [0..32] [282..71]

Back

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYSDYLKLL KIFVVGVFPC TLFVNAPHGK LAKQSKLFSK GYISGRVGWV LMELVAPLTF  60
   61 LYAIRNNRHF ESTLPSLGDG SNRDYLDSCR KVLAGMFLVH YANRALVSPL LMAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVSPMHWTVF VSAVLFNFLN GMSIGLYLVQ ASVQHHPVSI IRRYIGMFLW LMGWLGNMYH  60
   61 DNILYDLRRS SNKKKDPDNL DTVQSENSYY RIPYGGLFQY VSCPNYFCEW IEWFGCYLAA 120
  121 GPSAEPFWWF FLSEILLMLP RALKAHQWYC KKFPKYPANR RAIIPFLM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.744727
Match: PF02544.7
Description: No description for PF02544.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle