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View Structure Prediction Details

Protein: SPAC458.03
Organism: Schizosaccharomyces pombe
Length: 868 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC458.03.

Description E-value Query
Range
Subject
Range
gi|46105470, gi|... - gi|46105470|ref|XP_380539.1| hypothetical protein FG00363.1 [Gibberella zeae PH-1], gi|42546780|gb|E...
783.0 [0..27] [852..79]
gi|39958727, gi|... - gi|39958727|ref|XP_364437.1| hypothetical protein MGG_09282 [Magnaporthe grisea 70-15], gb|EAA55475....
753.0 [0..30] [852..87]
gi|85119565 - gi|85119565|ref|XP_965662.1| hypothetical protein NCU02531 [Neurospora crassa OR74A]
gi|32422573, gi|... - gi|32422573|ref|XP_331730.1| hypothetical protein [Neurospora crassa], gi|28927474|gb|EAA36426.1| pr...
736.0 [0..27] [852..81]
gi|67523923, gi|... - gi|67523923|ref|XP_660021.1| hypothetical protein AN2417.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
721.0 [0..27] [849..86]
gi|42602056, gi|... - gi|42602056|gb|AAS21644.1| unknown; 1200003M09Rik protein [Mus musculus], gi|15029722|gb|AAH11077.1|...
619.0 [0..194] [846..213]
gi|109490353, gi... - gi|62655853|ref|XP_220236.3| PREDICTED: similar to CG31285-PA [Rattus norvegicus], gi|109490353|ref|...
598.0 [0..203] [846..225]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFASELSK PIQKPRLKEI LKELQHIGVP SPCNLRLYHE LISVIVPTFW NGKINSEIDF  60
   61 LLAKCFSTLL GLKLLCVRLD NFVQEANLQN IHLVTVYLEL LEKAFECIDL DDNCKLIWES 120
  121 TVLSDHQKQS LWTEFIFFLG NFKITNSMSA AMLTFKVYDD SKRLKASSMA DYIGVLSSKL 180
  181 ACIISKPAV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPEIYSKLF HYLLHSSNLK AFINPLIPLT QKFCVQLQKL FADLTVSDQM LFLNQLLLEH  60
   61 NTKYPTNFSY STARDDRITG SLATLLRLNF SSTHFLRLIE FYWGVPTNLI IKRVEVVCSS 120
  121 ISYKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [315-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDKKELEKTV DSLFNIWSNA QFLRSYTLLA QESLTIYLLL FIPKLEAKYL NNLSKSLMFS  60
   61 NAISCRLDSL DDDIRMHGMI MAEVISTYSG VSLSNPLAFD VPIMKTTKAK VLKSLSSLKD 120
  121 EFLPIEILND ESVIAETSIE KEETNVTHLE KPVISKNDDL IRGDDLEPYD FPDIDSED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [493-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDDDPTVSRS KTHSPVYVQD LCKMLKDTES FEKQRVALEN ASKLIKRKSA FGTELRDHAD  60
   61 ELLQTLISLQ NRFDLMNFDE MQMTAIVELL LTCLDICGPV ICTNLFVSDY SMRQKILILS 120
  121 CISLAASKFN DDDNERL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [630-746]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPSQLLPGNL HDQFYSPTIE KISDELERKL VFPVMSECKD YAEGPKFLQT RYISKQSEIE  60
   61 SKKPLPKANR LSLKVDKSLF LLLTSGYMLA SRKTAFIEPL FLVYYLKTLG ILFFETF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [747-868]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSKIEGANRM LREYVDVLNE VCRLRSDTPE VNEGLLFSFL AILEISSGRT LANEFGKHLL  60
   61 FFEAYTKFLF ESPDQGEKVK SLSAAVLILF ENKLSEFRTL ALEKLLDDSA PLVPERFGLA 120
  121 GL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle