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View Structure Prediction Details

Protein: SPCC63.07
Organism: Schizosaccharomyces pombe
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC63.07.

Description E-value Query
Range
Subject
Range
THG1_MOUSE - Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1
438.0 [0..1] [256..30]
gi|57085243 - gi|57085243|ref|XP_536453.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Canis fa...
438.0 [0..1] [256..130]
THG1_RAT - Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1
437.0 [0..1] [256..30]
gi|8923514, gi|2... - gi|8923514|ref|NP_060342.1| interphase cyctoplasmic foci protein 45 [Homo sapiens], gi|7020726|dbj|B...
437.0 [0..1] [256..30]
gi|114603135 - gi|114603135|ref|XP_518066.2| PREDICTED: interphase cytoplasmic foci protein 45 [Pan troglodytes]
436.0 [0..1] [256..30]
gi|109079563 - gi|109079563|ref|XP_001113603.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Maca...
436.0 [0..1] [256..30]
THG1_BOVIN - Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1
431.0 [0..1] [256..30]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSRFEYVK QYERLDRLLP ETYIVIRIDG KGFHKFTKKH DFEKPNDLRC LNLMNAAARV  60
   61 VMSEFTDIVL AYGDSDEYSF VWSKSTELYE RRESKLVSHV CSLFTSAFVF NWPKHFDIPL 120
  121 LSLPSFDGRA VLYPNMKVLR DYLHWRQVDC HINNLYNT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFWMLILKGG FTNTQAEEYL KGTVSAEKHE ILFSKFGINY NFEPEIYKKG SIWIREPIDQ  60
   61 EWHQQDKKFS VKQKKKMVLS ILHVSLIDDD FWTSRPFLEV LLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.292 0.015 tRNA modification d.58.3 Protease propeptides/inhibitors
View Download 0.252 0.013 tRNA modification d.1.1 Microbial ribonucleases
View Download 0.262 0.002 tRNA modification a.24.17 Group V grass pollen allergen
View Download 0.243 N/A N/A d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.231 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle