YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC63.07
Organism:	Schizosaccharomyces pombe
Length:	261 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC63.07.

Description	E-value	Query Range	Subject Range
THG1_MOUSE - Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1	438.0	[0..1]	[256..30]
gi\|57085243 - gi\|57085243\|ref\|XP_536453.1\| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Canis fa...	438.0	[0..1]	[256..130]
THG1_RAT - Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1	437.0	[0..1]	[256..30]
gi\|8923514, gi\|2... - gi\|8923514\|ref\|NP_060342.1\| interphase cyctoplasmic foci protein 45 [Homo sapiens], gi\|7020726\|dbj\|B...	437.0	[0..1]	[256..30]
gi\|114603135 - gi\|114603135\|ref\|XP_518066.2\| PREDICTED: interphase cytoplasmic foci protein 45 [Pan troglodytes]	436.0	[0..1]	[256..30]
gi\|109079563 - gi\|109079563\|ref\|XP_001113603.1\| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Maca...	436.0	[0..1]	[256..30]
THG1_BOVIN - Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1	431.0	[0..1]	[256..30]

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Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSRFEYVK QYERLDRLLP ETYIVIRIDG KGFHKFTKKH DFEKPNDLRC LNLMNAAARV  60
   61 VMSEFTDIVL AYGDSDEYSF VWSKSTELYE RRESKLVSHV CSLFTSAFVF NWPKHFDIPL 120
  121 LSLPSFDGRA VLYPNMKVLR DYLHWRQVDC HINNLYNT

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [159-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TFWMLILKGG FTNTQAEEYL KGTVSAEKHE ILFSKFGINY NFEPEIYKKG SIWIREPIDQ  60
   61 EWHQQDKKFS VKQKKKMVLS ILHVSLIDDD FWTSRPFLEV LLQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits